Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0086
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.39 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.39 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 PLPYIINFKKNCRKWCRN 312
           PLP +++  KNC  +C N
Sbjct: 272 PLPIVLSIVKNCLSYCFN 289


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 259 PLPYIINFKKNCRKWCRN 312
           PLP +++  KNC  +C N
Sbjct: 272 PLPIVLSIVKNCLSYCFN 289


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 300 FSTILLEINNIREGGRVKI 244
           F ++ L+I+ +RE  R+KI
Sbjct: 117 FQSVGLQIDTVREKRRIKI 135


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 551 PAKTGSDNNNKNAVTLQLIQIRVI 480
           PA+T  ++ N+N     L QIR I
Sbjct: 260 PAETSMNDANRNDCAKPLTQIRNI 283


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 551 PAKTGSDNNNKNAVTLQLIQIRVI 480
           PA+T  ++ N+N     L QIR I
Sbjct: 260 PAETSMNDANRNDCAKPLTQIRNI 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,119
Number of Sequences: 336
Number of extensions: 1442
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)