Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0083
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.71 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.71 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.71 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.71 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 193 RCLQATIELLKILRYL 240
           +CL+ T+++LKI+ YL
Sbjct: 61  KCLEITVKILKIVAYL 76


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 193 RCLQATIELLKILRYL 240
           +CL+ T+++LKI+ YL
Sbjct: 61  KCLEITVKILKIVAYL 76


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 193 RCLQATIELLKILRYL 240
           +CL+ T+++LKI+ YL
Sbjct: 61  KCLEITVKILKIVAYL 76


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = +1

Query: 193 RCLQATIELLKILRYL 240
           +CL+ T+++LKI+ YL
Sbjct: 61  KCLEITVKILKIVAYL 76


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 179 YLE*AFRLSKNKFRKNLVSSTITYLNVIFVMIQFI 75
           Y E  FRLSK K    LV++ +     IFV+ + +
Sbjct: 393 YRETYFRLSKTKTFCTLVTALVYCSLAIFVLCELL 427


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 327 RNYFSAPLRAPVTCIKFY 274
           R YF     APV C+ F+
Sbjct: 51  RTYFIYAFVAPVKCLAFF 68


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 327 RNYFSAPLRAPVTCIKFY 274
           R YF     APV C+ F+
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 327 RNYFSAPLRAPVTCIKFY 274
           R YF     APV C+ F+
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 353 IT*LCLLLFVNVYFRLLGLL 412
           +T LCL LF+ +   + GLL
Sbjct: 288 VTFLCLYLFLIITLTIYGLL 307


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 158 LSKNKFRKNLVSSTITYLNVIFVM 87
           L   K RKNL    +  +NV++V+
Sbjct: 90  LKGRKIRKNLYYLLLFVINVLYVL 113


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 560 HVIIIGALLTY 592
           H ++ GALLTY
Sbjct: 6   HFLVFGALLTY 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,141
Number of Sequences: 336
Number of extensions: 3076
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)