Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0083
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083...    29   4.2  
11_01_0399 - 3015654-3015702,3016160-3017202                           27   9.8  

>05_07_0354 -
           29507068-29507170,29507406-29507431,29508264-29508301,
           29508722-29508825,29509005-29509024,29509251-29509299,
           29510319-29510406,29510463-29510562,29510660-29510737,
           29512688-29512804,29513718-29513821,29514497-29514569,
           29514904-29514981,29515091-29515215,29515278-29515341,
           29515439-29515597,29515950-29516048,29516496-29516624,
           29517010-29517075,29517160-29517304,29517379-29517500,
           29517683-29517838,29517918-29518029,29518891-29519036,
           29519148-29519252,29519391-29519540,29519703-29519776,
           29519902-29520055,29520142-29520408
          Length = 1016

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 202 QATIELLKILRYLDRGQGNTLHTDIKFNAGHWCPKRRTEIITLISVTTR 348
           Q  IE + I    D+G+    ++DI+   G W P  RT +  + S  +R
Sbjct: 813 QREIESISIKLEDDKGECERCYSDIEATKGKWLPTLRTLVSKINSTFSR 861


>11_01_0399 - 3015654-3015702,3016160-3017202
          Length = 363

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 339 YYTPGLPNFAFFCLLM 386
           +YT GLPNF FF + M
Sbjct: 80  HYTCGLPNFVFFAMAM 95


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,700,770
Number of Sequences: 37544
Number of extensions: 266752
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)