Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0082
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 197 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 78
           SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 197 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 78
           SQ + DG +HQ   +  PQ  Y +   +   + +  P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394


>Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical
           protein F15B9.10 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 452 VLKPTWLWLMMATLVVERCSCCSC 381
           +L+  WLW+ +  +V+    CC C
Sbjct: 217 ILQSKWLWIFVIGIVLPTLCCCCC 240


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 282 SPAVIRGHGGVLVSKEAPQMEVL 214
           SP  + G+GG+L+  E P+ E L
Sbjct: 180 SPYPVNGYGGILIGDETPKQEKL 202


>AF026214-7|AAP68943.1|  640|Caenorhabditis elegans Hypothetical
           protein F52H2.1 protein.
          Length = 640

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 237 PY*PTPLRDRGSLLENQERPGSSVHPRFWYS 329
           P+ PTP   R  + E+Q+ PG+  H   W+S
Sbjct: 328 PFTPTPENVRHEISESQDAPGNVTHD--WFS 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,836,756
Number of Sequences: 27780
Number of extensions: 201455
Number of successful extensions: 696
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)