Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0082
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.36 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 134 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLT 247
           +RIVGG+       P +AG+      G   ICGA++++
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPG--MICGATIIS 194


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 184 CWTCDRTHEWQNFH 225
           CW CD+  E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +1

Query: 148 WFCRQRWCSPPSCWTCDRTHE 210
           W CR ++    S W  D  H+
Sbjct: 926 WSCRCKFLQELSSWVSDNAHK 946


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 184 CWTCDRTHEWQ 216
           CW CD+  E++
Sbjct: 557 CWVCDQCEEYE 567


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +1

Query: 145 GWFCRQRW 168
           GW C  RW
Sbjct: 377 GWICEHRW 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,954
Number of Sequences: 438
Number of extensions: 2512
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)