Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0081
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.059
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.059
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 33 0.18
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 33 0.24
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 33 0.24
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 1.7
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.7
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37182| Best HMM Match : DUF225 (HMM E-Value=1) 29 2.2
SB_18224| Best HMM Match : Maf (HMM E-Value=6.8) 29 2.9
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_15054| Best HMM Match : Keratin_B2 (HMM E-Value=6.3) 29 3.9
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 28 5.1
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 6.8
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_18556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.8
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_14569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 58 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 228
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 229 ENYDKDVSMYE*HMPSTSAQTSSRVLLSNK 318
D+++ E P + +V + +K
Sbjct: 152 PQLSNDIALIELSSPVPLSDRGHQVSVGSK 181
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 357 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 424 GWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 34.7 bits (76), Expect = 0.059
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 357 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 673 GWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 357 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGL 503
GWG +G + L + ++ + +++ C Q DR +T+N CAG+
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM 398
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 213 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 49
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ + + +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 19 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 189
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 190 YVHFAV 207
Y FAV
Sbjct: 198 Y--FAV 201
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 30.7 bits (66), Expect = 0.97
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +1
Query: 19 EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 189
+V L + Q+C G ++ L+ A CF F P + G S RR G+
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 190 YVHFAVNHPEFSEENYDKDVSMYE*HMPSTSAQTSSRV 303
+ HP+++ +++ D+++ + P A+ +SRV
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQP---AEFNSRV 1346
>SB_41315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1761
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 155 DLPVAVSPVKYLMFTLLLTIPNSLRRITTRM*ACTSNT-----CHPLRPKHPAGCY 307
D P+ + ++ +++T+ + ITT + A ++NT HP P HPA Y
Sbjct: 1686 DPPLFAQQINVIISIVIITVTADTKAITTTITATSTNTLPPINLHPNAPTHPATTY 1741
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/104 (25%), Positives = 42/104 (40%)
Frame = +1
Query: 4 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGE 183
+LV +E + P N+W ++ +LT Y STA G+ Y + G S E
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY------AVGGESEADGEDE 163
Query: 184 ISYVHFAVNHPEFSEENYDKDVSMYE*HMPSTSAQTSSRVLLSN 315
A P E YD +++E P + + S V + N
Sbjct: 164 DGEADLA---PSNLVERYDLATNVWEAVAPMATPRISHAVAVLN 204
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 357 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
GWG LH+ + + + + CR+ + D +VT N FCAG
Sbjct: 251 GWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAG 296
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 351 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
+LGWG T L + + V N C++ Y+ VT N CAG
Sbjct: 1299 MLGWGVTEN--KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG 1346
>SB_37182| Best HMM Match : DUF225 (HMM E-Value=1)
Length = 1282
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 81 LPLPFNCYLFPWRILRS-CIPSHYRW-IFPSQ*AR*NILCSLCC*PSRIL*GELRQGCEH 254
+P+ +C P +L S C PS +FP I CS C P R+L C H
Sbjct: 755 IPIACSCRCVPHHVLMSMCFPSRAHVDVFP-------ITCSCRCVPHRVLMSMCSPSCAH 807
Query: 255 VRV 263
V V
Sbjct: 808 VDV 810
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 84 PLPFNCYLFPWRILRS-CIPSHYRW-IFPSQ*AR*NILCSLCC*PSRIL*GELRQGCEHV 257
P+ +C P R+L S C PS +FP I CS C P+R+L Q HV
Sbjct: 989 PIACSCRCVPHRVLMSMCFPSRAHVDVFP-------ITCSCRCVPNRVLMSMCFQSRNHV 1041
Query: 258 RV 263
V
Sbjct: 1042 DV 1043
>SB_18224| Best HMM Match : Maf (HMM E-Value=6.8)
Length = 603
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = +2
Query: 77 PTTTTFQLLPVSMENST--ILHTVALSLDLPVA---VSPVKYLMFTLLLTIPNSLRRITT 241
P+ T+ Q +P +N +L T AL L V V ++ L LLL NS +
Sbjct: 383 PSATSLQHIPSLTDNKVAELLDTTALHLTDQVCEAFVVSLESLRLPLLLLPKNSHKGARQ 442
Query: 242 RM*ACTSNTCHPLRPKHPAGCYYPTRCRNTPGY 340
+ HP+ A C TR TP +
Sbjct: 443 NVSYARGERAHPITQGGTAKCELRTRRTRTPNH 475
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 49 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPEF 222
F C G ++++ ++ A C H Y ++ +R + + + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
Query: 223 SEENYDKDVSMYE 261
++ D+++ E
Sbjct: 189 NDRRIVNDIALLE 201
>SB_15054| Best HMM Match : Keratin_B2 (HMM E-Value=6.3)
Length = 222
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 84 PLPFNCYLFPWRILRS-CIPSHYRW-IFPSQ*AR*NILCSLCC*PSRIL*GELRQGCEHV 257
P+ +C P R+L S C PS +FP I CS C P+R+L Q HV
Sbjct: 71 PIACSCRCVPHRVLMSMCFPSRAHVDVFP-------ITCSCRCVPNRVLMSMCFQSRNHV 123
Query: 258 RV 263
V
Sbjct: 124 DV 125
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 351 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
+ GWG TV GGS + G L + L V +C+ V + + CAG
Sbjct: 157 ITGWGRTVGGGSAA-GILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAG 205
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 77 PTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSLRRITTRM*AC 256
P +LP+ + +TILH VA++ LP+ V + T+ +P L ITT +
Sbjct: 644 PLVVITTILPLVVI-TTILHLVAITTILPLVVITTTLPLVTITTILP--LVAITTILPLV 700
Query: 257 TSNTCHPL 280
T T PL
Sbjct: 701 TITTILPL 708
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 351 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGL 503
+ GWGT GG+ L + + + ++ C Y + D+ CAGL
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL 124
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 74 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 226
SP+T+ Q++P + + L T + S +LPV + FT IP +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193
>SB_18556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 493 APVWSGWWPRLRQY*LGC 546
AP+W+ W R+RQY +GC
Sbjct: 13 APMWNSWGWRIRQY-IGC 29
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 351 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGL 503
+ GWGT GG+ L + + + ++ C Y + D+ CAGL
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL 468
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 351 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 500
+ GWGT GGS + L++ + + + C Y G ++ + CAG
Sbjct: 758 ITGWGTLSSGGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAG 803
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 268 CVTRTCSHPCRNSPQRIR 215
C T+ CSH C N+P R
Sbjct: 835 CATKVCSHNCTNTPGSYR 852
>SB_14569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 181 EISYVHFAVNHPEFSEENYDKDVSMYE*HMPSTSAQTSSRVLLSNKV 321
E Y H HP F ++K MY + S +A +S++V L N +
Sbjct: 37 EAMYAHAMYKHPTFIYSMHNKGRKMYS--VSSRNAGSSAKVFLVNGI 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,913,209
Number of Sequences: 59808
Number of extensions: 517174
Number of successful extensions: 1309
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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