Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0078
         (331 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5AW47 Cluster: Profilin; n=2; core eudicotyledons|Rep:...    34   0.52 
UniRef50_Q395P0 Cluster: Diguanylate cyclase; n=2; Burkholderia ...    34   0.69 
UniRef50_Q3SK01 Cluster: Putative diguanylate cyclase/phosphodie...    32   2.1  
UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p...    32   2.8  
UniRef50_A4JDE8 Cluster: Bacteriophage Mu P family protein; n=3;...    31   4.9  
UniRef50_Q6ZP31 Cluster: CDNA FLJ26619 fis, clone MPB09660; n=3;...    31   4.9  
UniRef50_Q1DK62 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_A0NYA5 Cluster: Chemotaxis sensory transducer; n=1; Sta...    31   6.5  
UniRef50_A3BVX2 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q0K173 Cluster: Fusaric acid resistance efflux transpor...    30   8.5  
UniRef50_A3TJH4 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_Q7XSY2 Cluster: OSJNBb0056F09.14 protein; n=2; Oryza sa...    30   8.5  
UniRef50_Q4QJ08 Cluster: Putative uncharacterized protein; n=3; ...    30   8.5  
UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing p...    30   8.5  

>UniRef50_A5AW47 Cluster: Profilin; n=2; core eudicotyledons|Rep:
           Profilin - Vitis vinifera (Grape)
          Length = 825

 Score = 34.3 bits (75), Expect = 0.52
 Identities = 21/56 (37%), Positives = 26/56 (46%)
 Frame = +1

Query: 52  FVPDRIQSHCVSRGSASVGRHLGRRWGVLLQLQNGFVERYHVPIYLVLSNCKFCFN 219
           FV   IQSH  S G  S   +  R +   L L  G +E +  P YLV   C  CF+
Sbjct: 553 FVQYDIQSHIFSFGVQSRCAYSSRHFESPLFLHFGHLESFSSPXYLVFIACSSCFS 608


>UniRef50_Q395P0 Cluster: Diguanylate cyclase; n=2; Burkholderia
           cepacia complex|Rep: Diguanylate cyclase - Burkholderia
           sp. (strain 383) (Burkholderia cepacia (strain ATCC
           17760/ NCIB 9086 / R18194))
          Length = 602

 Score = 33.9 bits (74), Expect = 0.69
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -3

Query: 131 PQRRPRWRPTDADPRETQWDCIRSGTKWHWFSSGATPHKHV 9
           P +  RWR  DA P+ T       GT WH F + AT  KH+
Sbjct: 395 PGQGLRWREGDARPQRTA----DGGTVWHGFITDATDRKHI 431


>UniRef50_Q3SK01 Cluster: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor; n=1; Thiobacillus denitrificans
           ATCC 25259|Rep: Putative diguanylate
           cyclase/phosphodiesterase (GGDEF & EAL domains) with
           PAS/PAC and GAF sensor - Thiobacillus denitrificans
           (strain ATCC 25259)
          Length = 1059

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -1

Query: 130 PSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHT 17
           P+  ++  R++  H++ NG ++ L ++GT LV E H T
Sbjct: 547 PTAFRENTRKVIAHSEWNGEITQLRKDGTALVVEAHWT 584


>UniRef50_Q960B5 Cluster: SD09502p; n=3; Sophophora|Rep: SD09502p -
           Drosophila melanogaster (Fruit fly)
          Length = 1071

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 7   VTCLCGVAPELNQCHFVPDRIQSHCVSRGSASVGRH 114
           + C CG+   L QC  +P  + +HC   G+ S  RH
Sbjct: 653 IVCSCGLQGRLEQCQPLPSYMHAHCTLPGARSY-RH 687


>UniRef50_A4JDE8 Cluster: Bacteriophage Mu P family protein; n=3;
           Betaproteobacteria|Rep: Bacteriophage Mu P family
           protein - Burkholderia vietnamiensis (strain G4 / LMG
           22486) (Burkholderiacepacia (strain R1808))
          Length = 376

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = -3

Query: 137 NTPQRRPRWRPTDADPRETQWDCIRSGTK----WHWFSSGAT 24
           +T Q +P W     DP +T WD +    +    W WF    T
Sbjct: 130 DTVQTQPTWDKISVDPGDTAWDALVHAAEGEGLWPWFEPDGT 171


>UniRef50_Q6ZP31 Cluster: CDNA FLJ26619 fis, clone MPB09660; n=3;
           Homo sapiens|Rep: CDNA FLJ26619 fis, clone MPB09660 -
           Homo sapiens (Human)
          Length = 370

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 146 SCSNTPQRRPRWRPTDA 96
           SC NTP R+PR  PTDA
Sbjct: 119 SCPNTPNRKPRETPTDA 135


>UniRef50_Q1DK62 Cluster: Putative uncharacterized protein; n=1;
            Coccidioides immitis|Rep: Putative uncharacterized
            protein - Coccidioides immitis
          Length = 1106

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 131  PQRRPRWRPTDADPRETQWDCIRS 60
            P   P W PT   P E QWD +R+
Sbjct: 1017 PAANPAWYPTPEAPPEKQWDTVRT 1040


>UniRef50_A0NYA5 Cluster: Chemotaxis sensory transducer; n=1;
           Stappia aggregata IAM 12614|Rep: Chemotaxis sensory
           transducer - Stappia aggregata IAM 12614
          Length = 840

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -1

Query: 178 VHDTVLQIHFVAAATRPSGDQDGGRRMQTHAKRNGTVSDLAQ 53
           V+DT++++  VA ATR S DQ  G  +   A+R G V  L Q
Sbjct: 641 VNDTLVRVEEVAGATRTSNDQIKG--LSAAAERIGAVVQLIQ 680


>UniRef50_A3BVX2 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 110

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -3

Query: 131 PQRRPRWRP---TDADPRETQWDCIRSGT 54
           PQRRPRWRP        R   W   R GT
Sbjct: 45  PQRRPRWRPQRRLGQQRRRATWHSFRQGT 73


>UniRef50_Q0K173 Cluster: Fusaric acid resistance efflux
           transporter,permease protein; n=2; Cupriavidus
           necator|Rep: Fusaric acid resistance efflux
           transporter,permease protein - Ralstonia eutropha
           (strain ATCC 17699 / H16 / DSM 428 / Stanier
           337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
           428 / Stanier337))
          Length = 697

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = +3

Query: 102 RRPPSWSPLGRV-AAATKWICRTV--SCTYL 185
           R PPSW P G   AA   W  R V  +CTYL
Sbjct: 308 RPPPSWYPAGTTPAAPADWHARLVAATCTYL 338


>UniRef50_A3TJH4 Cluster: Putative uncharacterized protein; n=1;
           Janibacter sp. HTCC2649|Rep: Putative uncharacterized
           protein - Janibacter sp. HTCC2649
          Length = 203

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 91  GSASVGRHLGRRWGVLLQLQNGFVERYHVPIYLVL 195
           G+ ++GR +GR+WG+++ L +  V +  VP ++VL
Sbjct: 48  GATNIGRAVGRKWGIVVGLLD--VLKGFVPTFVVL 80


>UniRef50_Q7XSY2 Cluster: OSJNBb0056F09.14 protein; n=2; Oryza
           sativa (japonica cultivar-group)|Rep: OSJNBb0056F09.14
           protein - Oryza sativa subsp. japonica (Rice)
          Length = 269

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +3

Query: 6   GDVFVWCSSGTKPVPFCARSDTVPLRFAWVCIRRPPSWSPL 128
           G ++ WCSS   P P  A S    L     C RR    SPL
Sbjct: 189 GGMYPWCSSPASPPPSSATSTCTALSPGTSCCRRCRRVSPL 229


>UniRef50_Q4QJ08 Cluster: Putative uncharacterized protein; n=3;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 2356

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 24   CSSGTKPVPFCARSDTVPLR-FAWVCIRRPPSWSPLGRVAAAT 149
            CSS T+P P  AR+  VP+R +  +C     ++     +AAA+
Sbjct: 1654 CSSLTQPAPLAARAAAVPVRQYCLICFSPDHAYVECPELAAAS 1696


>UniRef50_Q9Y2K1 Cluster: Zinc finger and BTB domain-containing
           protein 1; n=24; Tetrapoda|Rep: Zinc finger and BTB
           domain-containing protein 1 - Homo sapiens (Human)
          Length = 713

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 109 GRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSP 5
           GR++Q HA+R G   DL  NG G   E      +P
Sbjct: 460 GRQLQEHAQRCGEPQDLTMNGLGNTEEKMDLEENP 494


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,309,568
Number of Sequences: 1657284
Number of extensions: 6413714
Number of successful extensions: 19333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19329
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 9961543501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)