Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0078
         (331 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.12 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.12 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   0.63 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   0.83 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   1.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   7.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  RIQSHCVSRGSASVGRHLGRRWGVL 138
           ++ + C  + SA++ + LGRRW  L
Sbjct: 496 KVVAECTLKESAAINQILGRRWHAL 520


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  RIQSHCVSRGSASVGRHLGRRWGVL 138
           ++ + C  + SA++ + LGRRW  L
Sbjct: 388 KVVAECTLKESAAINQILGRRWHAL 412


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 107 PTDADPRETQW--DCIRSGTK-WHWFSSGATPHK 15
           P  A P + +W  D + + +   HW  SGA P K
Sbjct: 216 PLYASPLDGEWQRDNLNANSSITHWILSGADPQK 249


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -3

Query: 311 IFYYHIRTY 285
           IFYYHI TY
Sbjct: 396 IFYYHISTY 404


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 31  PELNQCHFVPDRIQSHCVSRGSASVG 108
           P  + C F+   +  HC  + S+SVG
Sbjct: 61  PSADYCLFLEMTLAHHCRFKFSSSVG 86


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 93  PTRNAMGLYPI 61
           PT  A+GL+PI
Sbjct: 629 PTFTALGLFPI 639


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 296 IRTYVTIFIQYE 261
           + TY+ IFIQ++
Sbjct: 374 VTTYLVIFIQFD 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,038
Number of Sequences: 336
Number of extensions: 1701
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)