Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0074
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.2  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 590 DMSLESIFRRF*KIRCSIQAFRRKLIISQEPNN 492
           D+ ++ +F RF     +  AF  ++   QEPNN
Sbjct: 124 DVEIKEVFSRFSNDVIATAAFGIRVNSVQEPNN 156


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 477 ISFG*QVYLPHIPRYNNHITITPDFSYLCS 388
           I+FG   Y+  +P + N      +  Y+CS
Sbjct: 153 ITFGWHTYIFDVPNFVNEYVQAIEVLYICS 182


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -1

Query: 445 YPQV*QPHHDYARLLVPVQLTLLQHMDSSQRQLP 344
           +PQ  QPHH    ++   Q     H      Q P
Sbjct: 175 HPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQP 208


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -1

Query: 445 YPQV*QPHHDYARLLVPVQLTLLQHMDSSQRQLP 344
           +PQ  QPHH    ++   Q     H      Q P
Sbjct: 177 HPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQP 210


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 580 WNRYSAGFKRFDAPSRHSGESSLSPKN 500
           W + +    R +  SR  GE+S + KN
Sbjct: 388 WRKNNPNDNRNNTSSRAQGETSRNSKN 414


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/46 (21%), Positives = 20/46 (43%)
 Frame = +2

Query: 122 VQKDRAVKQIAEYFQSKASCNVASINQCSKNELCDNNTKELIRDVL 259
           +Q    +  + ++ + K  C++     CS    C   T+EL  + L
Sbjct: 456 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETL 501


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/46 (21%), Positives = 20/46 (43%)
 Frame = +2

Query: 122 VQKDRAVKQIAEYFQSKASCNVASINQCSKNELCDNNTKELIRDVL 259
           +Q    +  + ++ + K  C++     CS    C   T+EL  + L
Sbjct: 463 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETL 508


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 203 CSKNELCDNNTKEL 244
           C K   CDNN  EL
Sbjct: 38  CDKYWKCDNNVAEL 51


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 203 CSKNELCDNNTKEL 244
           C K   CDNN  EL
Sbjct: 38  CDKYWKCDNNVAEL 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,833
Number of Sequences: 336
Number of extensions: 3901
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)