Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0074
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.66 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   1.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   1.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.0  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    23   2.0  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   2.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.7  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   3.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 271 VLGAGRGPLVRATFNASDITNTKVKVI 351
           V   G+G LV  T  A D TNT V ++
Sbjct: 179 VATTGKGELVSLTVQAMDSTNTMVYMV 205


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 462 QVYLPHIPRYNNHI 421
           Q+Y PH+P Y++ I
Sbjct: 269 QLYYPHVPEYSSSI 282


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 462 QVYLPHIPRYNNHI 421
           Q+Y PH+P Y++ I
Sbjct: 284 QLYYPHVPEYSSSI 297


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 340 LWYLLYRKH*MWLSLGVPGPHQVP 269
           L+Y L      W S GV GP  VP
Sbjct: 18  LYYYLTSTFDFWKSRGVVGPKPVP 41


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 319 SDITNTKVKVIAVEKNPCAVVVLAAQVREVWR--NRDVVVIPGDMRQINLSPKADIIVSE 492
           S+ +NT   VI  +K P  + + A +++++    +RD   +PG      +  K DII  E
Sbjct: 91  SNASNTSKTVILSDKGPEGIQINATELQKIKLEIHRD---LPGKSTTTTVEVKRDIINPE 147


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 319 SDITNTKVKVIAVEKNPCAVVVLAAQVREVWR--NRDVVVIPGDMRQINLSPKADIIVSE 492
           S+ +NT   VI  +K P  + + A +++++    +RD   +PG      +  K DII  E
Sbjct: 91  SNASNTSKTVILSDKGPEGIQINATELQKIKLEIHRD---LPGKSTTTTVEVKRDIINPE 147


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -2

Query: 453 LPHIPRYNNHI-TITPD 406
           LP  P YNNH+   TPD
Sbjct: 80  LPTTPEYNNHLYGSTPD 96


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 340 LWYLLYRKH*MWLSLGVPGPHQVPL 266
           +++ + R+H + L+  +PGP  +PL
Sbjct: 28  IYFRISRRHLLELAEKIPGPPALPL 52


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +1

Query: 319 SDITNTKVKVIAVEKNPCAVVVLAAQVREVWR--NRDVVVIPGDMRQINLSPKADIIVSE 492
           S+ +NT   VI  +K P  + + A +++++    +RD   +PG      +  K DII  E
Sbjct: 91  SNTSNTSKTVILSDKGPEGIQINATELQKIKLEIHRD---LPGKSTITTVEVKRDIINPE 147


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 155 QQSVSQPGPSVHQSTP 108
           Q SV QP  SVHQ  P
Sbjct: 28  QASVEQPSFSVHQVYP 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,995
Number of Sequences: 438
Number of extensions: 5011
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)