Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0074
         (676 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g31120.2 68417.m04418 Skb1 methyltransferase family protein c...    80   2e-15
At4g31120.1 68417.m04417 Skb1 methyltransferase family protein c...    80   2e-15
At5g10610.1 68418.m01228 cytochrome P450 family protein similar ...    29   2.1  
At3g06930.2 68416.m00823 protein arginine N-methyltransferase fa...    29   3.8  
At3g06930.1 68416.m00822 protein arginine N-methyltransferase fa...    29   3.8  
At1g04870.2 68414.m00484 protein arginine N-methyltransferase fa...    29   3.8  
At5g49020.2 68418.m06066 protein arginine N-methyltransferase fa...    28   5.0  
At5g49020.1 68418.m06065 protein arginine N-methyltransferase fa...    28   5.0  
At5g12260.1 68418.m01441 expressed protein                             28   6.6  
At1g04870.1 68414.m00483 protein arginine N-methyltransferase fa...    28   6.6  
At4g29510.1 68417.m04210 protein arginine N-methyltransferase, p...    27   8.7  

>At4g31120.2 68417.m04418 Skb1 methyltransferase family protein
           contains Pfam profile:  PF05185 Skb1 methyltransferase
          Length = 584

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +1

Query: 265 VMVLGAGRGPLVRATFNASDITNTKVKVIAVEKNPCAVVVLAAQVR-EVWRNRDVVVIPG 441
           +MV+GAGRGPLVRA+  A++ T+ K+KV AVEKNP AVV L   V+ E W +  V +I  
Sbjct: 367 LMVVGAGRGPLVRASLQAAEETDRKLKVYAVEKNPNAVVTLHNLVKMEGWED-VVTIISC 425

Query: 442 DMRQINLSPKADIIVSELLGSW 507
           DMR  N   +ADI+VSELLGS+
Sbjct: 426 DMRFWNAPEQADILVSELLGSF 447



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = +2

Query: 11  PLQPLADNLDTHTYNVFEKDPVKYNQYQXAIAQALIDVQKDRAVKQI 151
           PLQPL DNL+  TY  FE+D VKY QYQ A+ +AL+D   D    ++
Sbjct: 317 PLQPLMDNLEAQTYETFERDSVKYIQYQRAVEKALVDRVPDEKASEL 363



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +3

Query: 507 GDNELSPECLDGASNLLKPAEYRFQAHIDSYVAPITSPRLWAAAK 641
           GDNELSPECLDGA   LKP      +   S++ PIT+ +L+   K
Sbjct: 448 GDNELSPECLDGAQRFLKPDGISIPSSYTSFIQPITASKLYNDVK 492


>At4g31120.1 68417.m04417 Skb1 methyltransferase family protein
           contains Pfam profile:  PF05185 Skb1 methyltransferase
          Length = 642

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +1

Query: 265 VMVLGAGRGPLVRATFNASDITNTKVKVIAVEKNPCAVVVLAAQVR-EVWRNRDVVVIPG 441
           +MV+GAGRGPLVRA+  A++ T+ K+KV AVEKNP AVV L   V+ E W +  V +I  
Sbjct: 367 LMVVGAGRGPLVRASLQAAEETDRKLKVYAVEKNPNAVVTLHNLVKMEGWED-VVTIISC 425

Query: 442 DMRQINLSPKADIIVSELLGSW 507
           DMR  N   +ADI+VSELLGS+
Sbjct: 426 DMRFWNAPEQADILVSELLGSF 447



 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 24/47 (51%), Positives = 31/47 (65%)
 Frame = +2

Query: 11  PLQPLADNLDTHTYNVFEKDPVKYNQYQXAIAQALIDVQKDRAVKQI 151
           PLQPL DNL+  TY  FE+D VKY QYQ A+ +AL+D   D    ++
Sbjct: 317 PLQPLMDNLEAQTYETFERDSVKYIQYQRAVEKALVDRVPDEKASEL 363



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +3

Query: 507 GDNELSPECLDGASNLLKPAEYRFQAHIDSYVAPITSPRLWAAAK 641
           GDNELSPECLDGA   LKP      +   S++ PIT+ +L+   K
Sbjct: 448 GDNELSPECLDGAQRFLKPDGISIPSSYTSFIQPITASKLYNDVK 492


>At5g10610.1 68418.m01228 cytochrome P450 family protein similar to
           Cytochrome P450 91A1 (SP:Q9FG65)  [Arabidopsis
           thaliana]; similar to cytochrome P450, Helianthus
           tuberosus, EMBL:HTCYP81L
          Length = 500

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 362 FSTAITLTLVFVISEALNVALTRGPRPAPSTITVIGHL 249
           F + +T TL+F I++    +L     P+P+ + +IGHL
Sbjct: 8   FFSFLTATLIFFITKKFLWSLNSKLPPSPTPLPIIGHL 45


>At3g06930.2 68416.m00823 protein arginine N-methyltransferase
           family protein similar to protein arginine
           methyltransferase [Mus musculus] GI:5257221
          Length = 535

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 424 VVVIPGDMRQINLSPKADIIVSELLGS 504
           + VI G +  I L  KADI++SE +G+
Sbjct: 235 ITVIKGKVEDIELPEKADILISEPMGT 261


>At3g06930.1 68416.m00822 protein arginine N-methyltransferase
           family protein similar to protein arginine
           methyltransferase [Mus musculus] GI:5257221
          Length = 534

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +1

Query: 424 VVVIPGDMRQINLSPKADIIVSELLGS 504
           + VI G +  I L  KADI++SE +G+
Sbjct: 235 ITVIKGKVEDIELPEKADILISEPMGT 261


>At1g04870.2 68414.m00484 protein arginine N-methyltransferase
           family protein similar to SP|Q96LA8 Protein arginine
           N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
          Length = 383

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 26/77 (33%), Positives = 36/77 (46%)
 Frame = +1

Query: 271 VLGAGRGPLVRATFNASDITNTKVKVIAVEKNPCAVVVLAAQVREVWRNRDVVVIPGDMR 450
           VL  G G  + A ++A        KV AVE    A    A  V+    +  V VI G + 
Sbjct: 74  VLDVGTGSGILAIWSAQAGAR---KVYAVEATKMADHARAL-VKANNLDHIVEVIEGSVE 129

Query: 451 QINLSPKADIIVSELLG 501
            I+L  K D+I+SE +G
Sbjct: 130 DISLPEKVDVIISEWMG 146


>At5g49020.2 68418.m06066 protein arginine N-methyltransferase
           family protein similar to protein arginine
           methyltransferase [Mus musculus] GI:5257221
          Length = 526

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 424 VVVIPGDMRQINLSPKADIIVSELLGS 504
           + VI G +  I L  KAD+++SE +G+
Sbjct: 236 ITVIKGKIEDIELPEKADVLISEPMGT 262


>At5g49020.1 68418.m06065 protein arginine N-methyltransferase
           family protein similar to protein arginine
           methyltransferase [Mus musculus] GI:5257221
          Length = 528

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 424 VVVIPGDMRQINLSPKADIIVSELLGS 504
           + VI G +  I L  KAD+++SE +G+
Sbjct: 238 ITVIKGKIEDIELPEKADVLISEPMGT 264


>At5g12260.1 68418.m01441 expressed protein 
          Length = 624

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 433 IPGDM-RQINLSPKADIIVSELLGSWEIMSFRLNAWMEHRIF 555
           +PG    ++++ PK ++I+ +L+G+W  + F    W E R++
Sbjct: 221 VPGKHGNKLHVDPKTNLILYQLVGTWGQLLFP-KPWKEFRLW 261


>At1g04870.1 68414.m00483 protein arginine N-methyltransferase
           family protein similar to SP|Q96LA8 Protein arginine
           N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
          Length = 280

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 424 VVVIPGDMRQINLSPKADIIVSELLG 501
           V VI G +  I+L  K D+I+SE +G
Sbjct: 18  VEVIEGSVEDISLPEKVDVIISEWMG 43


>At4g29510.1 68417.m04210 protein arginine N-methyltransferase,
           putative similar to protein arginine N-methyltransferase
           1-variant 2 [Homo sapiens] GI:7453575
          Length = 390

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
 Frame = +1

Query: 190 IYQPMFKK*IMRQQYERVD*RCPITV---MVLGAGRGPLVRATFNASDITNTKVKVIAVE 360
           I++ M K  +  + Y+ V  +    +   +VL  G G  + + F A         V AVE
Sbjct: 81  IHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVGAGTGILSLFCAKA---GAAHVYAVE 137

Query: 361 KNPCAVVVLAAQVREVWRNRDVV-VIPGDMRQINL-SPKADIIVSELLG 501
            +  A   +A ++ +     DV+ V+ G + +I L +PK D+I+SE +G
Sbjct: 138 CSQMAD--MAKEIVKANGFSDVITVLKGKIEEIELPTPKVDVIISEWMG 184


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,074,557
Number of Sequences: 28952
Number of extensions: 318343
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)