Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0073
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.                   58   4e-08
BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate o...    58   4e-08
BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.    58   4e-08
AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog prot...    58   4e-08
AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.           58   4e-08
AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.           58   4e-08
AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with simil...    58   4e-08
AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with simil...    52   3e-06
BC018528-1|AAH18528.1|  122|Homo sapiens polymerase (RNA) I poly...    30   9.0  
BC015319-1|AAH15319.1|  122|Homo sapiens polymerase (RNA) I poly...    30   9.0  
AL136439-2|CAI16934.1|  122|Homo sapiens polymerase (RNA) I poly...    30   9.0  

>CR542144-1|CAG46941.1|   82|Homo sapiens P8 protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>BT006896-1|AAP35542.1|   82|Homo sapiens p8 protein (candidate of
           metastasis 1) protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>BC002434-1|AAH02434.1|   82|Homo sapiens nuclear protein 1 protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>AF135266-1|AAD49221.1|   82|Homo sapiens p8 protein homolog
           protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>AF069074-1|AAC19385.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>AF069073-1|AAC19384.1|   82|Homo sapiens P8 protein protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>AC002425-2|AAC05336.1|   82|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 82

 Score = 57.6 bits (133), Expect = 4e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>AC002425-1|AAC05335.1|  100|Homo sapiens Gene product with
           similarity to Rat P8 protein.
          Length = 100

 Score = 51.6 bits (118), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 136 IFTGHGGKQ-RTKKEASEHTNHFDPSGHSRKIVTKLMNAEQTRR 264
           + TG GG++ RTK+EA+ +TN   P GH RK+VTKL N+E+ +R
Sbjct: 53  LVTGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKR 96


>BC018528-1|AAH18528.1|  122|Homo sapiens polymerase (RNA) I
           polypeptide D, 16kDa protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 360 ADTRGVFGWMLVSEIDGTS*AFFCSHKISTSPTHRGCDLERDNATNEPSRSR 515
           A+T G  GWM    +  T+  F  +   +T P+H+  D E+     EP++S+
Sbjct: 26  AETMGPMGWMKCP-LASTNKRFLINTIKNTLPSHKEQDHEQKEGDKEPAKSQ 76


>BC015319-1|AAH15319.1|  122|Homo sapiens polymerase (RNA) I
           polypeptide D, 16kDa protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 360 ADTRGVFGWMLVSEIDGTS*AFFCSHKISTSPTHRGCDLERDNATNEPSRSR 515
           A+T G  GWM    +  T+  F  +   +T P+H+  D E+     EP++S+
Sbjct: 26  AETMGPMGWMKCP-LASTNKRFLINTIKNTLPSHKEQDHEQKEGDKEPAKSQ 76


>AL136439-2|CAI16934.1|  122|Homo sapiens polymerase (RNA) I
           polypeptide D, 16kDa protein.
          Length = 122

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 360 ADTRGVFGWMLVSEIDGTS*AFFCSHKISTSPTHRGCDLERDNATNEPSRSR 515
           A+T G  GWM    +  T+  F  +   +T P+H+  D E+     EP++S+
Sbjct: 26  AETMGPMGWMKCP-LASTNKRFLINTIKNTLPSHKEQDHEQKEGDKEPAKSQ 76


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,117,748
Number of Sequences: 237096
Number of extensions: 2030047
Number of successful extensions: 7581
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7573
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)