Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0071
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q186I4 Cluster: Putative membrane-associated metal-depe...    37   0.36 
UniRef50_UPI00006CC3EB Cluster: hypothetical protein TTHERM_0013...    36   0.82 
UniRef50_Q10M36 Cluster: NB-ARC domain containing protein, expre...    33   4.4  

>UniRef50_Q186I4 Cluster: Putative membrane-associated
           metal-dependent hydrolase; n=1; Clostridium difficile
           630|Rep: Putative membrane-associated metal-dependent
           hydrolase - Clostridium difficile (strain 630)
          Length = 178

 Score = 37.1 bits (82), Expect = 0.36
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +3

Query: 318 VLLVFSFIKDEVSFTNDNIQYVCKSLSFIISY 413
           +LL++SF K    FTN+NI + C S  FII Y
Sbjct: 88  LLLIYSFFKSLTIFTNNNIVFSCLSSGFIIGY 119


>UniRef50_UPI00006CC3EB Cluster: hypothetical protein TTHERM_00133380;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00133380 - Tetrahymena thermophila SB210
          Length = 1680

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +3

Query: 291  IMSFNQENKVLLVFSFIKDEVSFTNDNIQYVCKSLSFIISYKQKSIN 431
            +  F +EN VL V       ++F N  I  VC++L F+IS+KQ S N
Sbjct: 1525 VSDFIRENNVLSVIFVSLRNINFANTQI--VCQALEFLISFKQASSN 1569


>UniRef50_Q10M36 Cluster: NB-ARC domain containing protein,
           expressed; n=2; Oryza sativa|Rep: NB-ARC domain
           containing protein, expressed - Oryza sativa subsp.
           japonica (Rice)
          Length = 1073

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/43 (41%), Positives = 21/43 (48%)
 Frame = -2

Query: 134 WTSLFLTSYKFGNSRYAVMCLTHTLALVSCSCRYLCLEYGRLQ 6
           W S F TS    N RY V  L + LA +      LC+E G LQ
Sbjct: 479 WRSFFETSGSSTNQRYRVPSLMNELASLVSKSECLCIEPGNLQ 521


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,419,885
Number of Sequences: 1657284
Number of extensions: 10432816
Number of successful extensions: 22716
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22714
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)