Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0069
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.9  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 670  FGTNSN-TFVTYMMQVHK*QAHFYKIDKIGTYLIFFFQFI 554
            FG  +N T+     +VH     + +++ IG   +FFF  I
Sbjct: 1299 FGVKTNITYDESTQEVHI-SKEYLQLEPIGLVFVFFFALI 1337


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 670  FGTNSN-TFVTYMMQVHK*QAHFYKIDKIGTYLIFFFQFI 554
            FG  +N T+     +VH     + +++ IG   +FFF  I
Sbjct: 1299 FGVKTNITYDESTQEVHI-SKEYLQLEPIGLVFVFFFALI 1337


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 614 STFLQDRQNRYVFNFFLSV 558
           + + +DR N Y+F++ LSV
Sbjct: 111 AVYARDRVNPYLFSYALSV 129


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 219 VFLFKEMGSNITEAIKVDLPTVFRIVFIDECLK 121
           +FL   +GS +   I +D        F+D C K
Sbjct: 674 IFLLLTLGSLLQMVISMDSTVEEAKTFVDRCYK 706


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,986
Number of Sequences: 336
Number of extensions: 3426
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)