Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0067
         (747 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A6C1S3 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   7.5  
UniRef50_UPI000065FFA8 Cluster: Homolog of Homo sapiens "PREDICT...    33   9.9  
UniRef50_Q2GNF3 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 465 RWVDELTAHLVLSGYWSP 412
           RWVDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175


>UniRef50_A6C1S3 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 395

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = -1

Query: 300 GRNRQGDGTYPRGLTKVLPPVITQIIILRVTLLLHDVIPSPWKSIVNIC 154
           GRN +    + RGL   LPP++T +I++ V  +++D I +P  + V  C
Sbjct: 22  GRNHR---FFLRGLAISLPPILTLVIVIWVAGIVNDYIITPTTTTVRYC 67


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 327 SNRNALLLHGRNRQGDGTYPRGL 259
           + RNALL+HG N  G+ TY RGL
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGL 134


>UniRef50_UPI000065FFA8 Cluster: Homolog of Homo sapiens "PREDICTED
           "similar to RIKEN cDNA E330026B02; n=1; Takifugu
           rubripes|Rep: Homolog of Homo sapiens "PREDICTED
           "similar to RIKEN cDNA E330026B02 - Takifugu rubripes
          Length = 2403

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 707 DADRLQPDQTAEYGITKTSLVIDFITVLKNLKLTM 603
           DAD+ Q DQ A Y   K + +ID  T LK L+ ++
Sbjct: 531 DADKAQLDQIASYPTNKHTFIIDSFTKLKTLEASL 565


>UniRef50_Q2GNF3 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 563

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +2

Query: 47  MPCSLRDKTSGAFVLSDAPVFESQAGTNFSNELRTQQMFTIDFHGEGITS 196
           +PC LR+K+S A          ++A  + S E + ++M+ + F GE + S
Sbjct: 312 VPCKLREKSSDAITEEQEKQLRTRAKAHSSEEDKWKEMYRVIFPGEKVPS 361


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,063,677
Number of Sequences: 1657284
Number of extensions: 14099175
Number of successful extensions: 31108
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31100
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)