Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0066
         (561 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4N143 Cluster: Putative uncharacterized protein; n=3; ...    39   0.092
UniRef50_Q6CBT9 Cluster: Yarrowia lipolytica chromosome C of str...    37   0.28 
UniRef50_Q7Q7E7 Cluster: ENSANGP00000021165; n=1; Anopheles gamb...    36   0.85 
UniRef50_Q1JVB3 Cluster: Putative uncharacterized protein; n=3; ...    34   2.6  
UniRef50_Q2BPS0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  
UniRef50_Q23WS3 Cluster: Putative uncharacterized protein; n=2; ...    32   8.0  

>UniRef50_A4N143 Cluster: Putative uncharacterized protein; n=3;
           Haemophilus influenzae|Rep: Putative uncharacterized
           protein - Haemophilus influenzae 22.1-21
          Length = 104

 Score = 38.7 bits (86), Expect = 0.092
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 56  VTEITIPDISF--NFLTNDLIGK-SLSIPKSFLDTLVSCHVIFPNRVMYEAFPNNNLPAG 226
           +TE+ + D  F  +F  ND IG  SL+I  ++ D LVS  VI PNR +      + LP G
Sbjct: 13  ITEVNLDDEVFFLHFSWNDTIGFWSLTIENAYNDELVSSIVILPNRPLIAPVRRDELPLG 72

Query: 227 NI 232
            +
Sbjct: 73  EL 74


>UniRef50_Q6CBT9 Cluster: Yarrowia lipolytica chromosome C of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome C of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 511

 Score = 37.1 bits (82), Expect = 0.28
 Identities = 20/65 (30%), Positives = 35/65 (53%)
 Frame = +1

Query: 280 RGAAVSLSGTYELRSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIVEESEKA*ANGIFL 459
           R   + LSG    R+L  ++ +  +SL+RQ   +T+  IKP N+  V     A  NG+ +
Sbjct: 151 RAEPLGLSGA---RNLFAYITEKEKSLSRQHKFVTIGGIKPDNTPSVRYMCGATCNGVAV 207

Query: 460 IRCLL 474
           + C++
Sbjct: 208 VSCII 212


>UniRef50_Q7Q7E7 Cluster: ENSANGP00000021165; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000021165 - Anopheles gambiae
           str. PEST
          Length = 594

 Score = 35.5 bits (78), Expect = 0.85
 Identities = 23/73 (31%), Positives = 36/73 (49%)
 Frame = +1

Query: 274 GFRGAAVSLSGTYELRSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIVEESEKA*ANGI 453
           GF G  V+++GT  L  LV + A+  R+  R  FH + +   PR   +      A   G+
Sbjct: 408 GFHGVNVTVTGTGALAELVRNTAEGFRTNERLDFHASNETCLPRPVPL-SGWTVAGIYGL 466

Query: 454 FLIRCLLLSCEKY 492
           F +  LL++ E Y
Sbjct: 467 FALLALLITTEAY 479


>UniRef50_Q1JVB3 Cluster: Putative uncharacterized protein; n=3;
           Desulfuromonas acetoxidans DSM 684|Rep: Putative
           uncharacterized protein - Desulfuromonas acetoxidans DSM
           684
          Length = 562

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -1

Query: 240 RKNILPAGKLLLGKASYITRLGNMTWHDTKVSKKDLGMD---KDFPMRSFVKKLKDMSGM 70
           +K  +P G  L+       +LGN+T    + +  ++G D   ++ P+  F+KKL+D +G 
Sbjct: 457 KKGDIPFGGTLVVHGHQAAKLGNLTTMPKRGTPMEVGRDLVAQNMPISEFLKKLRDAAGR 516

Query: 69  V 67
           +
Sbjct: 517 I 517


>UniRef50_Q2BPS0 Cluster: Putative uncharacterized protein; n=1;
           Neptuniibacter caesariensis|Rep: Putative
           uncharacterized protein - Neptuniibacter caesariensis
          Length = 214

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = -1

Query: 210 LLGKASYITRLGNMTWHDTKVSKKDLGMDKDFPMRSFVKKLKD 82
           L+G+   +TR+  + W D  VS +D G+ +   +R +  K+K+
Sbjct: 162 LIGEYEIMTRIWALEWFDLPVSPEDYGLIRLVDLREYFDKIKE 204


>UniRef50_Q23WS3 Cluster: Putative uncharacterized protein; n=2;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1163

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +2

Query: 71   IPDISFNFLTNDLIGKSLSIPKSFLDTLVSCHVIFPNRVMYEAFPNNNLPAGNIF 235
            I   SF  LTN L+ + LS     +D  +   +  P + M + FP+N     N F
Sbjct: 900  ISQTSFGILTNSLVCQKLSF-LLLIDVPIPAQIYLPLKAMKDQFPSNQFKMLNFF 953


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,567,293
Number of Sequences: 1657284
Number of extensions: 10593958
Number of successful extensions: 25915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25904
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)