Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0066
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.2  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.8  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   6.8  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   9.0  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   9.0  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
          ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 88 KGYVWYGDLCYGRSLSNSR 32
          +G  W+ D CYG   +NSR
Sbjct: 39 EGGSWHNDTCYGGGGANSR 57


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 208  VRESFVHYTVREYDMARYQSVQEG 137
            + +SF+ Y +  Y   RY +V EG
Sbjct: 1688 IGDSFLKYAITTYLYCRYDNVHEG 1711


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 164 GTIPKCPRRTWGWTRI 117
           G IP+C R T+ W  I
Sbjct: 63  GQIPQCERLTYTWKEI 78


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 164 GTIPKCPRRTWGWTRI 117
           G IP+C R T+ W  I
Sbjct: 63  GQIPQCERLTYTWKEI 78


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 164 GTIPKCPRRTWGWTRI 117
           G IP+C R T+ W  I
Sbjct: 41  GQIPQCERLTYTWKEI 56


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 518 HFHYSHYEQYFSQD 477
           H HYSH + Y+ Q+
Sbjct: 133 HSHYSHNQYYYMQN 146


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 166 CHIP*PCNVRSFP*QQFA 219
           C IP  CN++ F  Q+FA
Sbjct: 413 CKIPPGCNLKIFNNQEFA 430


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 293 YL*AEPMSSGHWSHMWLIT 349
           ++ A+   +G W+ +WL+T
Sbjct: 116 FIAADNKDNGTWTQLWLVT 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,028
Number of Sequences: 2352
Number of extensions: 11741
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)