BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0066 (561 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY051964-1|AAK93388.1| 1266|Drosophila melanogaster LD43047p pro... 29 4.3 AE014297-1339|AAG22146.2| 1266|Drosophila melanogaster CG14712-P... 29 4.3 Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein. 29 5.7 Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein. 29 5.7 AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p pro... 29 5.7 AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,... 29 5.7 AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,... 29 5.7 AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,... 29 5.7 AE014297-1014|AAF54432.1| 357|Drosophila melanogaster CG16899-P... 28 9.9 >AY051964-1|AAK93388.1| 1266|Drosophila melanogaster LD43047p protein. Length = 1266 Score = 29.1 bits (62), Expect = 4.3 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 280 RGAAVSLSGTYEL-RSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIVEES 429 +G+ SL+GT RSL+ A +S ++TRQ+ L L ++ PR V S Sbjct: 41 KGSNTSLNGTRTPERSLMNRSATSSSTITRQK--LNLSQVDPRTFADVHSS 89 >AE014297-1339|AAG22146.2| 1266|Drosophila melanogaster CG14712-PA protein. Length = 1266 Score = 29.1 bits (62), Expect = 4.3 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +1 Query: 280 RGAAVSLSGTYEL-RSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIVEES 429 +G+ SL+GT RSL+ A +S ++TRQ+ L L ++ PR V S Sbjct: 41 KGSNTSLNGTRTPERSLMNRSATSSSTITRQK--LNLSQVDPRTFADVHSS 89 >Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein. Length = 3347 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 3118 QIVFGHFGVVTCMARSECNITS 3139 >Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein. Length = 3554 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 3325 QIVFGHFGVVTCMARSECNITS 3346 >AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p protein. Length = 969 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 740 QIVFGHFGVVTCMARSECNITS 761 >AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB, isoform B protein. Length = 3522 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 3293 QIVFGHFGVVTCMARSECNITS 3314 >AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA, isoform A protein. Length = 3584 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 3355 QIVFGHFGVVTCMARSECNITS 3376 >AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC, isoform C protein. Length = 3719 Score = 28.7 bits (61), Expect = 5.7 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 Query: 133 QVLLGHFGIVPCHIP*PCNVRS 198 Q++ GHFG+V C CN+ S Sbjct: 3490 QIVFGHFGVVTCMARSECNITS 3511 >AE014297-1014|AAF54432.1| 357|Drosophila melanogaster CG16899-PA protein. Length = 357 Score = 27.9 bits (59), Expect = 9.9 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 189 CTKLSLTTICLPVIYSSWKQFNLHQLCDWFPWSCCIFERN 308 C K + +I S KQ L+++ +WF + C F RN Sbjct: 244 CLKEQVLMCNRAIIDSPDKQLTLNEIYNWFQNTFCYFRRN 283 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,689,690 Number of Sequences: 53049 Number of extensions: 491644 Number of successful extensions: 1265 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1217 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1265 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2172596895 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -