Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0066
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ...    31   0.75 
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ...    31   0.75 
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p...    28   4.0  
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like...    28   4.0  
AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical ...    27   7.0  

>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
           protein H24G06.1b protein.
          Length = 1601

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 321 PELIGS-AQRYSSSTETNRTAGEG*TASRKNILPAGKLLLGKASYITRLGNMTW 163
           PE  GS A  YS   ++ R +    ++  K ILP G  L+G +SY  R+G+ ++
Sbjct: 789 PEFSGSSASLYSDDDDSTRFSSSVRSSRTKRILPNGGHLIGDSSY-ARVGDSSF 841


>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
           protein H24G06.1a protein.
          Length = 1680

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -1

Query: 321 PELIGS-AQRYSSSTETNRTAGEG*TASRKNILPAGKLLLGKASYITRLGNMTW 163
           PE  GS A  YS   ++ R +    ++  K ILP G  L+G +SY  R+G+ ++
Sbjct: 789 PEFSGSSASLYSDDDDSTRFSSSVRSSRTKRILPNGGHLIGDSSY-ARVGDSSF 841


>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
           protein F15B9.7 protein.
          Length = 2577

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = +1

Query: 295 SLSGTYELRSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIV 420
           SL+ +  +  ++  + DN+ +  ++ +++T+ E  PR SQI+
Sbjct: 560 SLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII 601


>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
           protein F15B9.7 protein.
          Length = 2577

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = +1

Query: 295 SLSGTYELRSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIV 420
           SL+ +  +  ++  + DN+ +  ++ +++T+ E  PR SQI+
Sbjct: 560 SLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII 601


>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
           protein FMI-1 protein.
          Length = 2596

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = +1

Query: 295 SLSGTYELRSLVTHVADNSRSLTRQRFHLTLQEIKPRNSQIV 420
           SL+ +  +  ++  + DN+ +  ++ +++T+ E  PR SQI+
Sbjct: 560 SLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII 601


>AF016419-1|AAG24051.1|  499|Caenorhabditis elegans Hypothetical
           protein F07G11.4 protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -2

Query: 548 VQYYSILIIKHFHYSHYEQYFSQDK 474
           ++YYS L++K ++  +Y+ Y+S  K
Sbjct: 419 IRYYSDLVLKCYNEKYYDLYYSNRK 443


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,280,762
Number of Sequences: 27780
Number of extensions: 252639
Number of successful extensions: 614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)