Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0064
         (278 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0744 + 21121757-21122202,21122316-21122737,21122992-211231...    28   0.93 
07_03_1792 + 29569623-29569737,29569848-29569981,29570117-295702...    27   1.6  
03_02_0599 - 9730204-9730314,9730766-9731549,9731631-9732051,973...    27   1.6  
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    27   2.1  
07_03_0749 + 21212463-21212911,21212976-21213305,21213336-212134...    27   2.8  
06_03_1071 + 27360824-27360994,27361264-27361337,27361431-273614...    26   4.9  
04_01_0341 - 4442727-4445597                                           26   4.9  
04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051     25   8.6  
03_02_0675 - 10333083-10333740,10334910-10335039,10335218-10335350     25   8.6  

>07_03_0744 +
           21121757-21122202,21122316-21122737,21122992-21123117,
           21123198-21123319,21123413-21123623,21123955-21124192,
           21124284-21124431,21124547-21124879
          Length = 681

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 88  DVGWHHGATAMSLWALVIHPW 26
           DVGW + A A  L ALV H W
Sbjct: 163 DVGWFNAAVAKILAALVEHTW 183


>07_03_1792 +
           29569623-29569737,29569848-29569981,29570117-29570284,
           29572817-29573003,29573098-29573422,29573591-29574368,
           29574897-29575022
          Length = 610

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 113 PKRSTALKRRWLASWCDCHEPLGTGNSS 30
           P R   LK  W   W  CH   G+G+ S
Sbjct: 64  PIRKNELKNLWQHVWRRCHSSSGSGSES 91


>03_02_0599 -
           9730204-9730314,9730766-9731549,9731631-9732051,
           9732139-9732385,9733730-9733921,9734071-9734204,
           9734316-9734477,9736162-9736200,9737507-9737825
          Length = 802

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 113 PKRSTALKRRWLASWCDCHEPLGTGNSS 30
           P R   LK  W   W  CH   G+G+ S
Sbjct: 199 PIRKNELKNLWQHVWRRCHSSSGSGSES 226


>11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,
            3489132-3491102,3492090-3492149,3492240-3492436,
            3492678-3492963
          Length = 1143

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 23   PPWMNYQCPKAHGSR 67
            PPW   + PKAHG+R
Sbjct: 1096 PPWSQEEDPKAHGAR 1110


>07_03_0749 +
           21212463-21212911,21212976-21213305,21213336-21213436,
           21213758-21213883,21213962-21214083,21214177-21214450,
           21214767-21215004,21215101-21215248,21215400-21215732
          Length = 706

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 88  DVGWHHGATAMSLWALVIHPW 26
           +VGW + A A  L ALV H W
Sbjct: 174 EVGWFNAAVAKILAALVEHAW 194


>06_03_1071 +
           27360824-27360994,27361264-27361337,27361431-27361485,
           27361788-27361838,27361935-27362008,27362086-27362134,
           27362620-27362704,27362812-27362868,27363001-27363044
          Length = 219

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 116 IPKRSTALKRRWLASWCDCH 57
           +P+  T  +  WL+ WC+ H
Sbjct: 178 VPRDVTPTRELWLSFWCEVH 197


>04_01_0341 - 4442727-4445597
          Length = 956

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 111 WNCIHCCYIRRCKNIRT 161
           W+C+  C+I RC  + T
Sbjct: 732 WDCLKRCHIERCHKLNT 748


>04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051
          Length = 312

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 114 NCIHCCYIRRCKNIRTGLPQLLASQV 191
           + IH C  R C +   G+P L+A+ V
Sbjct: 236 SAIHTCISRLCLHSFNGVPALIANNV 261


>03_02_0675 -
          10333083-10333740,10334910-10335039,10335218-10335350
          Length = 306

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 16 KPPTMDELPVPKGSWQSHHDA 78
          +PP  D+  V KG W +  DA
Sbjct: 3  RPPCCDKANVKKGPWTAEEDA 23


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,291,067
Number of Sequences: 37544
Number of extensions: 106453
Number of successful extensions: 338
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)