Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0063
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 36 0.046
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 34 0.11
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 31 0.74
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 30 1.7
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 30 1.7
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 5.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 5.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 28 9.1
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +3
Query: 525 FGRTSDAASGANNQQKRQVSLQVI---TNAVCARTFGNNVIIASTLCVDGSNGRSTCSGD 695
FG SD G +N + + + T A C +G ++ S C ++ CSGD
Sbjct: 215 FGWGSDPGKGFDNAAFPMIQVLTLATETLATCEENWGTSIPFDS-FCTAEEEDKNVCSGD 273
Query: 696 SGGPLTSAAAEASTD 740
SGG LT ++++ +
Sbjct: 274 SGGGLTFHQSDSARE 288
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +3
Query: 507 LAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCAR--TFGNNVIIASTLCVDGSNGR- 677
L G+G T + +S + R++ + +++ C+ + + + S LC S G+
Sbjct: 176 LCVVTGWGSTIEGSS-LSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKI 234
Query: 678 STCSGDSGGPLTSA 719
+C GDSGGPL A
Sbjct: 235 DSCQGDSGGPLMCA 248
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Frame = +2
Query: 71 LKEINAKIIINTHEMNQHKIYIN-LENIYHVEYKN---ISINYN 190
LK +N+K++INT + ++ + IN +++ YH +N SIN N
Sbjct: 807 LKTVNSKVLINTEFLQENSLTINVIDSCYHENIQNHVLSSINNN 850
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 408 ILAKRHHQPQPCWLHQQHPAHQP 476
+ ++RHH QP HQQ P HQP
Sbjct: 758 VSSRRHHYTQPHPHHQQMPHHQP 780
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +3
Query: 531 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 710
R + AA+G+N Q +Q Q + C + V+ + + DG G ST G GG
Sbjct: 2071 RNAAAAAGSNVQFIQQQQQQQQSGKNCGQGQSFVVMGSQSSSNDGQGGASTVGGGGGGSQ 2130
Query: 711 TSAAAEASTDRYHIVRITQVAREG 782
+ + I I QV G
Sbjct: 2131 QPHQQQQQQPQQRIQYIPQVTGSG 2154
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +3
Query: 531 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 710
R + AA+G+N Q +Q Q + C + V+ + + DG G ST G GG
Sbjct: 2071 RNAAAAAGSNVQFIQQQQQQQQSGKNCGQGQSFVVMGSQSSSNDGQGGASTVGGGGGGSQ 2130
Query: 711 TSAAAEASTDRYHIVRITQVAREG 782
+ + I I QV G
Sbjct: 2131 QPHQQQQQQPQQRIQYIPQVTGSG 2154
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 2373 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2405
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 2395 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2427
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 1216 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 1248
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 1194 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 1226
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 2373 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2405
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 614 GADGVGNDLEAHLAFLLVVGSRSSIGGPSEAGS 516
G DG G++L HLA L+ SS G P S
Sbjct: 2395 GQDGQGSNLYNHLAAQLLTHQESSTGAPGPTSS 2427
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 456 QHPAHQPSQWKQQLCWYLAWAAGFGRTSDAASGANNQQK 572
Q P+ QPS +QL + +A FGR ++ ASG + + K
Sbjct: 27 QRPSRQPSP-VEQLAPIRSHSADFGRAAEMASGNSEEGK 64
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 456 QHPAHQPSQWKQQLCWYLAWAAGFGRTSDAASGANNQQK 572
Q P+ QPS +QL + +A FGR ++ ASG + + K
Sbjct: 62 QRPSRQPSP-VEQLAPIRSHSADFGRAAEMASGNSEEGK 99
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 456 QHPAHQPSQWKQQLCWYLAWAAGFGRTSDAASGANNQQK 572
Q P+ QPS +QL + +A FGR ++ ASG + + K
Sbjct: 62 QRPSRQPSP-VEQLAPIRSHSADFGRAAEMASGNSEEGK 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,625,139
Number of Sequences: 27780
Number of extensions: 301354
Number of successful extensions: 1214
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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