Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0063
         (812 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    35   0.001
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.63 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 34.7 bits (76), Expect = 0.001
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = +3

Query: 522 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSG 701
           G+G TS   +G  +   ++ +L ++T   C + +GN  I+ + +C   + G+  C  DSG
Sbjct: 296 GWGHTS--FNGMLSHILQKTTLNMLTQVECYKYYGN--IMVNAMCAY-AKGKDACQMDSG 350

Query: 702 GPL 710
           GP+
Sbjct: 351 GPV 353


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 405 LILAKRHHQPQPCWLHQQHPAHQPSQWKQQ 494
           L+ ++ HHQ     +H QHP  QP Q + Q
Sbjct: 163 LVESQMHHQ-----MHTQHPHMQPQQGQHQ 187


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -2

Query: 388 SRSLYINRGMINFIPSMRXXXXXXLSS-NIAAPPSLNLLGEISLIK 254
           SRS+ +++   N + +++       +S  ++ PP+LNL+ +I L K
Sbjct: 2   SRSINMDQEKKNNVENLKGGGSTTPASPTLSTPPTLNLMEQILLAK 47


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 420  RHHQPQPCWLHQQHPAHQPSQWKQQ 494
            +  QPQP    QQ    QP Q +++
Sbjct: 1525 QQQQPQPQQQQQQQQQQQPQQQQKE 1549


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 553 EPTTNKNAK*ASRS 594
           EP TNKN K  SRS
Sbjct: 239 EPGTNKNGKFFSRS 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,427
Number of Sequences: 438
Number of extensions: 4376
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)