Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0061
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.9  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 421 TLLNLCVRCIEIKSEDLFK 477
           T+ N CV+C + + ED+ K
Sbjct: 65  TMKNGCVKCEQKQKEDVHK 83


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = -2

Query: 232 CDTLRRSGKKLSGLCLWADVPMNRSRNVENFMT-LKTQ*MISMKTTE*FPNLSVLFSL-- 62
           CD++  +  +L G     D+ +    N  +F+T LK    +         N S +F +  
Sbjct: 253 CDSVAHTAGELLGAVYSLDLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFN 312

Query: 61  -KVYDLFIMKQFRRLYS 14
             V  L +M QF   YS
Sbjct: 313 AIVTFLIVMVQFETNYS 329


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = -2

Query: 232 CDTLRRSGKKLSGLCLWADVPMNRSRNVENFMT-LKTQ*MISMKTTE*FPNLSVLFSL-- 62
           CD++  +  +L G     D+ +    N  +F+T LK    +         N S +F +  
Sbjct: 573 CDSVAHTAGELLGAVYSLDLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFN 632

Query: 61  -KVYDLFIMKQFRRLYS 14
             V  L +M QF   YS
Sbjct: 633 AIVTFLIVMVQFETNYS 649


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +3

Query: 96  SVVFIEIIYWVFRVMKFSTFRLRFI 170
           SV+F +++ W         F  RF+
Sbjct: 150 SVIFFDVVVWGLSASDLGVFFKRFL 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,174
Number of Sequences: 336
Number of extensions: 3437
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)