Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0059
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74033-3|CAA98477.1|  407|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z74033-3|CAA98477.1|  407|Caenorhabditis elegans Hypothetical
           protein F38B7.3 protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = +1

Query: 436 KPTYSSHYCSGP-ISPRLDSQP*NSHPDDANIVEVLHTTAGLIGYDYPLGDLDFYPSGGS 612
           +P     Y SGP + P     P   +P  A +    HTT  +    Y  G    Y  GG 
Sbjct: 182 RPASGQSYPSGPQVPPAYGQYPQPGYPQPAGVPTSSHTTVIVRDGGYGGGGYGGYGGGGG 241

Query: 613 G 615
           G
Sbjct: 242 G 242


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +1

Query: 469 PISPRLDSQP*NSHPDDANIVEVLHTTAGLIGYDYPLGDLDFYPSGGSGQSGCLD 633
           P+  +  +Q   + PD   +   L +  G  GY  PL   D  P    G+S  +D
Sbjct: 299 PLEVKQSAQTLFNDPDFQMLARSLQSGTGSSGYSNPLSARDIPPCSSDGRSVTID 353


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,680,486
Number of Sequences: 27780
Number of extensions: 313986
Number of successful extensions: 940
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)