Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0057
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318...    33   0.71 
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318...    33   0.71 
BC109207-1|AAI09208.1|  221|Homo sapiens SLC17A4 protein protein.      30   8.7  

>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 33.5 bits (73), Expect = 0.71
 Identities = 28/75 (37%), Positives = 31/75 (41%)
 Frame = +3

Query: 261 GGTQMLPSQSGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVS 440
           GG       SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVS
Sbjct: 20  GGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVS 79

Query: 441 PGRARPPTALIQGPS 485
           P    PP A    PS
Sbjct: 80  PS---PPRARRGSPS 91


>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 33.5 bits (73), Expect = 0.71
 Identities = 28/75 (37%), Positives = 31/75 (41%)
 Frame = +3

Query: 261 GGTQMLPSQSGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVS 440
           GG       SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVS
Sbjct: 20  GGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVS 79

Query: 441 PGRARPPTALIQGPS 485
           P    PP A    PS
Sbjct: 80  PS---PPRARRGSPS 91


>BC109207-1|AAI09208.1|  221|Homo sapiens SLC17A4 protein protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 18/73 (24%), Positives = 33/73 (45%)
 Frame = +3

Query: 315 LVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTALIQGPSCWV 494
           +V+  AP S   + T      SQG   +   ++ E      SPG + P  A+I+    W 
Sbjct: 10  MVNNTAPPSQPNASTERPSTDSQG---YWNETLKEFKAMDCSPGWSLPIRAMIKSLPLWA 66

Query: 495 VITQIYCDYTMLF 533
           ++   +C+Y + +
Sbjct: 67  ILVSYFCEYWLFY 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,767,745
Number of Sequences: 237096
Number of extensions: 2327869
Number of successful extensions: 7249
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7249
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)