Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0057
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p... 29 3.0
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein. 29 3.0
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 27 9.3
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 27 9.3
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 284 GGQHLSPTSRLDTELTVAPASSS 216
GG+ + PT+R T TVAPASSS
Sbjct: 460 GGEFVVPTTRAPTVATVAPASSS 482
>Z49207-9|CAA89068.2| 379|Caenorhabditis elegans Hypothetical
protein R07E3.3 protein.
Length = 379
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 526 CYSFRKKSFLNKNS-VRISLEYCAI*KRHSRIAR 624
C SF K+ KNS +R++ + CAI KRHS R
Sbjct: 62 CRSFASKTDSAKNSSLRLTFDQCAIEKRHSTSPR 95
>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 448 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 341
+P E + PSD L P+ LP C+ L +++ P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203
>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 448 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 341
+P E + PSD L P+ LP C+ L +++ P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203
>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 448 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 341
+P E + PSD L P+ LP C+ L +++ P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 489 WVVITQIYCDYTMLFFPKEVI 551
W +I+ +YC MLFF +VI
Sbjct: 60 WAIISTVYCYLVMLFFLVQVI 80
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 373 GPLLRVMLQHPDVGAATLTSRVQRVGS 293
GPL +L H D G TLT R+ +GS
Sbjct: 12 GPLNLGILGHVDSGKTTLTRRIAELGS 38
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 373 GPLLRVMLQHPDVGAATLTSRVQRVGS 293
GPL +L H D G TLT R+ +GS
Sbjct: 12 GPLNLGILGHVDSGKTTLTRRIAELGS 38
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 584 SNEIRTEFLFKNDFFRKE*HCVIAINLRNDYPTGGPLYECSGRAGSTRRDA 432
+++ TEF + + HCV GPLY+C GS R DA
Sbjct: 259 ASQANTEFGCPMGWLFQHGHCVDVDECNLGSHDCGPLYQCRNTQGSYRCDA 309
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 584 SNEIRTEFLFKNDFFRKE*HCVIAINLRNDYPTGGPLYECSGRAGSTRRDA 432
+++ TEF + + HCV GPLY+C GS R DA
Sbjct: 259 ASQANTEFGCPMGWLFQHGHCVDVDECNLGSHDCGPLYQCRNTQGSYRCDA 309
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -1
Query: 584 SNEIRTEFLFKNDFFRKE*HCVIAINLRNDYPTGGPLYECSGRAGSTRRDA 432
+++ TEF + + HCV GPLY+C GS R DA
Sbjct: 259 ASQANTEFGCPMGWLFQHGHCVDVDECNLGSHDCGPLYQCRNTQGSYRCDA 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,201,134
Number of Sequences: 27780
Number of extensions: 350921
Number of successful extensions: 969
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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