Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0053
(660 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 39 0.004
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.005
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 38 0.005
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 38 0.007
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.010
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 37 0.013
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 37 0.013
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 36 0.039
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 35 0.051
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.12
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.21
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.27
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.36
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.48
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.63
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.83
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.83
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 1.5
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.9
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.4
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +2
Query: 302 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-TLCVDGSNGRSTCSGDSGGP 478
RT S A Q Q L V ++ C RT G V + S ++ G G+ C GDSGGP
Sbjct: 162 RTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDSGGP 219
Query: 479 LTIGSGGSVNDRYHIVRISSR 541
GG R +VRI ++
Sbjct: 220 FVCEEGGKWVLRGALVRIGTK 240
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGS 502
+Q V+ + CA +T+ G +G S CSGDSGGPL GG+
Sbjct: 457 QQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDSGGPLVCHEGGT 509
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 317 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 85 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPLVC- 142
Query: 491 SGGSVNDRYHI 523
N R+HI
Sbjct: 143 ---EYNGRWHI 150
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGG 499
RQ + ++ + C R + T+ G G S C+GDSGGPL GG
Sbjct: 83 RQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNGDSGGPLVCEEGG 134
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 305 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 481
+SD + A+ Q+ +V L + C T G V S +C G+ G S C+GDSGGPL
Sbjct: 422 SSDQHTLADKLQQSKVPL--VNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGGPL 477
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 ALLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLHND 188
+LLT ++TAAHC T A +TL G + G S ++ H ++M + ND
Sbjct: 269 SLLTPGWALTAAHCL-TLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRND 327
Query: 189 VAIIN-HNHVGFTNNIQRINLASE 257
VA++ +V ++ + I L S+
Sbjct: 328 VALLKLSTYVQLSDKVGTICLPSQ 351
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPLTIGSGG 499
++ L V +NA C + G + + AS +C G GR C GDSGGPL G
Sbjct: 548 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEAG 600
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPLTIGSGG 499
++ L V +NA C + G + + AS +C G GR C GDSGGPL G
Sbjct: 88 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEAG 140
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 475
R + ++ N VC R+ +N T C DG G TC GDSGG
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGG 293
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTIGSGG 499
+Q + +++ C R +G + S +CV + N S+C GDSGGPL G
Sbjct: 465 QQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEG 518
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
A+ G +Q S+ V++ A C + + I S LC G TC GDSGGP+
Sbjct: 834 ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGIDTCQGDSGGPMVCE 892
Query: 491 SGG 499
S G
Sbjct: 893 SRG 895
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
++ G+ +QVS+ + + A C ++ N I S +C G C GDSGGP+
Sbjct: 35 SSGGSTPDYLQQVSVPIRSRARCDSSYPNK-IHDSMICAGIDKGGIDACQGDSGGPMVCE 93
Query: 491 SGG 499
+GG
Sbjct: 94 NGG 96
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
A G++ QV + +++ + C+R + + S +C S G +C GDSGGP+
Sbjct: 6 AEGGSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSGGPMVCE 63
Query: 491 SGGSVN 508
G N
Sbjct: 64 YNGKFN 69
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 317 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 429 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPLVCE 487
Query: 491 SGGSVNDRYHI 523
G R+HI
Sbjct: 488 YKG----RWHI 494
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTCSGDSGGPLTIGSGG 499
+Q + + ++ C R +G+ + + LC + N C GDSGGPL G
Sbjct: 88 QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNG 141
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIG 490
++ G+ + Q + + T + C R++ I A +C G TC GDSGGPL
Sbjct: 765 SSGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGGPLVCQ 823
Query: 491 SG 496
G
Sbjct: 824 HG 825
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 302 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG--RSTCSGDSGG 475
R +++ G+N Q + S+ ++ C + N I + + G G + TC GDSGG
Sbjct: 1919 RIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGG 1976
Query: 476 PLTIGSGG 499
PL S G
Sbjct: 1977 PLVCESKG 1984
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 34.7 bits (76), Expect = 0.067
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
++ GA + Q S+ +++ + C I S LC G +C GDSGGPL
Sbjct: 165 SSGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVC- 223
Query: 491 SGGSVNDRYHIVRISS 538
N R+H+ ++S
Sbjct: 224 --EDTNGRWHLEGVTS 237
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 34.7 bits (76), Expect = 0.067
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 9 ALLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQM---HGSYNMDTL 179
+L+++T VTAAHC R + Q+ + +G N T NV+ H YN L
Sbjct: 505 SLVSSTWVVTAAHCV-ARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRL 563
Query: 180 HNDVAII 200
ND+A+I
Sbjct: 564 SNDIALI 570
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 34.3 bits (75), Expect = 0.089
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 305 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLT 484
+SD AN Q+ +VS+ V+ S +C G+ G S C GDSGGPL
Sbjct: 95 SSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPLQ 153
Query: 485 IGSGG 499
G
Sbjct: 154 CEENG 158
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 34.3 bits (75), Expect = 0.089
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 326 ANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGG 499
A ++ +Q L + ++ C R +G+ V + LC S+ C+GDSGGPL G
Sbjct: 903 AISRHPQQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNG 961
Query: 500 S 502
S
Sbjct: 962 S 962
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 317 ASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRSTCSGDSGGPLTIGS 493
+ GA+ + +Q ++++ A C + ++ST+ G TC GDSGGPL +
Sbjct: 352 SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGPLVCEN 411
Query: 494 GGSVNDRYHIVRISS 538
N+++ +V ++S
Sbjct: 412 ----NNKWTLVGVTS 422
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 350 VSLQVITNAVCARTFGNNVIIAST-LCVDGSNG-RSTCSGDSGGPLTIGSGGSVNDRYHI 523
V + ++++A C + N I T LC G + +C DSGGPL GG RY+
Sbjct: 183 VMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEFDSGGPLACQKGG----RYYA 238
Query: 524 VRISS 538
V + S
Sbjct: 239 VGLVS 243
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPLTIGSGG 499
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL GG
Sbjct: 440 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPLVCERGG 494
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPLTIGSGG 499
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL GG
Sbjct: 689 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPLVCERGG 743
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGGS 502
+Q L + ++ C R +G+ V + LC S+ C+GDSGGPL GS
Sbjct: 579 QQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGS 632
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 323 GANNQQKRQVSLQVITNAVCARTFGNNVIIA--STLCVDGSNGRSTCSGDSGGPLTIGSG 496
G ++ +Q L V +++ C R V + S +C G G C GDSGGP G
Sbjct: 209 GQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGDSGGPFVCNEG 267
Query: 497 G 499
G
Sbjct: 268 G 268
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 338 QKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGP 478
Q R ++ V++ + C + + I +C G+ +C GDSGGP
Sbjct: 585 QLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDSCKGDSGGP 632
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 416 STLCVDGSNGRSTCSGDSGGPLTIGSGG 499
S +C G C GDSGGP GG
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGG 162
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 320 SGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSN--GRSTCSGDSGGPLT 484
SG + +Q+ + ++ +VC + II G N G+ C GDSGGPL+
Sbjct: 126 SGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGCLGDSGGPLS 182
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 356 LQVITNAVCARTFGNNVIIASTLCVDGSNGRST--CSGDSGGPLTIGSGG 499
L +++NA C R + + V + LC S+ C+GDSGG L GG
Sbjct: 2 LPLVSNAECQRKY-SKVNAKAHLCACSGQAASSGGCNGDSGGALVCEEGG 50
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 323 GANNQQKRQVSLQVITNAVC--ARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIGS 493
G + R+V + ++ +C A ++G VI LC G C DSGGPL
Sbjct: 178 GEQSLALREVQVHMVPRELCNSANSYGG-VIHERALCAGPREGGCGPCQFDSGGPLACSE 236
Query: 494 GG 499
GG
Sbjct: 237 GG 238
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 490
A+ G +Q S+ +++ + C + + I +S LC G C DSGGPL
Sbjct: 248 ASGGDTPDLLQQASVPIVSRSRCDKAYPGK-IDSSMLCAGLDKGGIDACQRDSGGPLVSK 306
Query: 491 SG 496
+G
Sbjct: 307 TG 308
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 347 QVSLQVITNAVC-ARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 481
++ + +++ VC A N I C GR +C GDSGGPL
Sbjct: 138 ELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPL 184
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTI 487
+QV L +++ VC N + D R C GDSG P+ +
Sbjct: 876 KQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDACKGDSGSPIVV 923
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 347 QVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTI 487
+ ++ ++ C + + ++ A+ C + S+ C GDSGGP ++
Sbjct: 268 EATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 481
+Q ++ V+ A C + + I S LC + G C GDSGGP+
Sbjct: 469 QQATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 347 QVSLQVITNAVCARTFGN-NVIIASTL-CVD-GSNGRSTCSGDSGGPLTIGSG 496
Q ++ +++ C + + + + ++S + C G+ G C GDSGGPL G
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEG 306
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 ALLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTR----VTTSNVQMHGSYNMDT 176
+L+ + +TAAHC ++R + + LG + T + S + H +YN T
Sbjct: 420 SLIHSNWVLTAAHCISSKRPA--EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRT 477
Query: 177 LHNDVAII 200
++ND+A++
Sbjct: 478 MYNDIALL 485
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +2
Query: 323 GANNQQKRQVSLQVITNAVCA-RTFGN-NV--------IIASTLCVD--GSNGRSTCSGD 466
G + +Q L+V++N C+ R G+ N+ + + LC G G++ C+GD
Sbjct: 168 GPTANKLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTGKNGCNGD 227
Query: 467 SGGP 478
SGGP
Sbjct: 228 SGGP 231
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGG 475
R + V + +C + + T C +G G TC GDSGG
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGG 235
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 498 PPLPMVRGPPESPLQVLRPLEPSTQRVEAMIT 403
PPLP PP P+Q RP P+T +A T
Sbjct: 920 PPLP----PPPPPIQTTRPTVPTTPTTQASTT 947
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 323 GANNQQKRQVSLQVITNAVCARTFG-NNVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSG 496
G Q R+ +++++ +C + N I LC G C DSGGPL+
Sbjct: 186 GTKPQVIREATVKLVPPEICNQVESYNGSIHVRALCAGFDQGGVDACQFDSGGPLSC--- 242
Query: 497 GSVNDRYHIVRISS 538
S+ R+++ + S
Sbjct: 243 -SIGSRFYLTGVVS 255
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 380 CARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGS 502
CA T N +A T GS+ +T DS T GSG S
Sbjct: 218 CASTTPNGGYLAITTARSGSSATTTPRSDSSAMTTPGSGSS 258
>SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 120 GTRVTTSNVQMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASEATTLLVLGP 284
G ++ +N HG + +++++ ++ + +V FT + INL T LV P
Sbjct: 375 GKKIIPNNQSKHGHRKLKRINSNMNLVKYENVSFTMLLIIINLFMCYTVYLVFLP 429
>SB_37928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = -1
Query: 513 RSLTLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFC 337
+S TLP + PP P +V+ P P + P+ + + L+ LT++ C
Sbjct: 79 KSSTLPRRHTTKSPPPKPPRVIPPKPPRLMEKKVFTCENPHCQKKEELLGIVELTFKSC 137
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRST---CSGDSGGPLTIGSGGSVNDR 514
++ + +++ CA ++ S + G ST C GDSGGP GS N R
Sbjct: 1475 QEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGGPFV--CQGS-NKR 1531
Query: 515 YHIVRISS 538
++I + S
Sbjct: 1532 WNIQGVVS 1539
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 344 RQVSLQVITNAVCARTFGNN--VIIASTLCVD--GSNGRSTCSGDSGGPLTIGSG 496
+Q + V+++ C R + V + LC G++ S C GDSGGP G
Sbjct: 431 QQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSISGCHGDSGGPFVCMGG 485
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 298 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 414
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,886,983
Number of Sequences: 59808
Number of extensions: 335452
Number of successful extensions: 1523
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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