Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0053
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    32   0.004
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   6.0  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   6.0  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   6.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +2

Query: 344 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPL 481
           ++ +L ++T   C + +GN  I+ + +C   + G+  C  DSGGP+
Sbjct: 311 QKTTLNMLTQVECYKYYGN--IMVNAMCAY-AKGKDACQMDSGGPV 353


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 389 TFGNNVIIASTL-CVDGSNGRSTCSGDSGGPLTIGSGGSV 505
           T G +V+++    C D   G  + S  +GG +T  SGGS+
Sbjct: 2   TKGRHVVMSCCCWCCDNLGGPGSSS--AGGVVTGASGGSI 39


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 48  CWRTRRAQARQFTLALGTANI 110
           CW TR+    Q    +GT+N+
Sbjct: 459 CWDTRKEYIPQNLGVIGTSNL 479


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 620 RQLNSSPDPGVEGCDSGEAGRVASLATLS*SERC 519
           RQ N +   GV+GCD    GR      ++  ERC
Sbjct: 101 RQCNDT-SIGVDGCDLMCCGRGYKTQEVTVVERC 133


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 620 RQLNSSPDPGVEGCDSGEAGRVASLATLS*SERC 519
           RQ N +   GV+GCD    GR      ++  ERC
Sbjct: 102 RQCNDT-SIGVDGCDLMCCGRGYKTQEVTVVERC 134


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 324 EPTTNKNAK*ASRS 365
           EP TNKN K  SRS
Sbjct: 239 EPGTNKNGKFFSRS 252


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 128 PGAS---GEDVSCAKSEGELTSLGSPG 57
           PG S   GE  S A ++G  T+  SPG
Sbjct: 893 PGCSSKNGEPTSAAFAQGFATAASSPG 919


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 473 GPLTIGSGGSVNDRYH 520
           G L  G+G SVN RY+
Sbjct: 379 GDLIEGTGRSVNPRYY 394


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 159 SYNMDTLHNDVAIINHNHVGFTNN 230
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 159 SYNMDTLHNDVAIINHNHVGFTNN 230
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,891
Number of Sequences: 438
Number of extensions: 3293
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)