Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0051
         (387 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   0.46 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           20   9.8  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 0.46
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -1

Query: 381 GNSRTIFSLYINK*KLETINYYVCR 307
           GNS  + +L ++K +   +N+++C+
Sbjct: 63  GNSAVLVALLVSKSRKSRMNFFICQ 87


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 300 LIFYIHNNLLFPTFIYLYIMKI*FYYY 380
           +IF +H  L    F Y +I+ +  YY+
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYYF 116


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 183 VKPRNDSISTIRSKTPAAV 239
           VK  N+  +T+R   PA+V
Sbjct: 98  VKQVNNGFATLRQHIPASV 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,102
Number of Sequences: 336
Number of extensions: 1318
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)