Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0051
(387 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1027 + 25496311-25496811 40 7e-04
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 38 0.002
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 38 0.002
05_05_0309 - 23987669-23988042,23989485-23989560 38 0.003
03_02_0817 + 11492699-11492774,11493605-11493978 38 0.003
09_04_0397 + 17273013-17273570 36 0.011
08_02_1589 + 28070286-28070525,28072224-28072565 36 0.011
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 36 0.011
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 36 0.011
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 36 0.015
10_07_0048 - 12354566-12354639,12355563-12355665,12355781-123559... 35 0.026
05_03_0020 - 7433619-7434089 35 0.026
09_04_0398 + 17278163-17278480 33 0.060
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 31 0.32
01_07_0252 - 42296138-42296281,42296527-42296613,42297043-422971... 31 0.42
07_03_1288 + 25518522-25518797 30 0.56
05_01_0336 - 2656774-2656992,2657112-2657326,2657611-2657812 30 0.74
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 30 0.74
12_01_0249 + 1850443-1851030 29 0.97
11_01_0250 + 1924261-1924848 29 0.97
09_04_0399 + 17283968-17284264 29 1.3
11_06_0304 - 22206490-22207065 28 2.2
10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689... 28 2.2
08_01_0121 - 963297-963743 27 5.2
03_05_1090 + 30313176-30313292,30314162-30314236,30314938-303151... 27 5.2
>12_02_1027 + 25496311-25496811
Length = 166
Score = 39.9 bits (89), Expect = 7e-04
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTAS 163
D++G I + LRH +++ G+K + +EV + + D+D G ++ + + M+ S
Sbjct: 111 DQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQVNFDEFVRMMMLS 164
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTAS 163
D+ G I + LRH + G+K + +EV E + D+D G I+ + + ++ A+
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAN 149
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D+ G I + LRH + G+K + +EV E + D+D G I+ + + ++ A
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMA 148
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D+ G I + LRH + G+K + +EV E + D+D G I+ + + ++ A
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D+ G I + LRH + G+K + +EV E + D+D G I+ + + ++ A
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
>09_04_0397 + 17273013-17273570
Length = 185
Score = 35.9 bits (79), Expect = 0.011
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTAS 163
D +G+I +E + L GD S ++ E ++D + G++D +AM+T S
Sbjct: 128 DGDGRISAEEVMQVLHKLGDSCSLEDCREMVKKIDRNRDGFVDMDDFMAMMTRS 181
>08_02_1589 + 28070286-28070525,28072224-28072565
Length = 193
Score = 35.9 bits (79), Expect = 0.011
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 8 EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTAS 163
+GKI L AL T G SADEV ++D D G+ID + I+ A+
Sbjct: 21 DGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 71
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D+ G I + LRH + G++ + +EV E + D+D G I+ + + + A
Sbjct: 96 DQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMA 148
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 59 DKFSADEVHEAYDQMDIDDKGYIDTTKL 142
DK S +E+ EA+ D D G+I T+L
Sbjct: 79 DKDSEEELKEAFRVFDKDQNGFISATEL 106
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLI 145
D+ G I + LRH + G+K + +EV E + D+D G I+ + +
Sbjct: 96 DQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 35.5 bits (78), Expect = 0.015
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D+ G I + LRH + GD S DE+ + + D D G I+ + + ++ A
Sbjct: 101 DQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVMMA 153
>10_07_0048 -
12354566-12354639,12355563-12355665,12355781-12355933,
12356105-12356132,12356414-12356450,12356563-12356746
Length = 192
Score = 34.7 bits (76), Expect = 0.026
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
D G ID + L A+ G + + +++H+ ++D D G ID + + M+T
Sbjct: 59 DGSGTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFDEFVHMMT 110
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
D GKI ++ + G+ F+ DEV E + D + G +D + + M+
Sbjct: 132 DNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEVDHEEFLKMM 182
>05_03_0020 - 7433619-7434089
Length = 156
Score = 34.7 bits (76), Expect = 0.026
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 8 EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIA 148
+GKI +E L L G EV D+MD D G++D ++ A
Sbjct: 16 DGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAA 62
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
D GKI + L L GDK S + +D D G ++ + M+
Sbjct: 99 DSNGKISARELHRVLRQLGDKCSVADCSRMIRSVDADGDGCVNFDEFKKMM 149
>09_04_0398 + 17278163-17278480
Length = 105
Score = 33.5 bits (73), Expect = 0.060
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
D +G+I + LR A+ G +F+ + D D GYID +++ ++
Sbjct: 41 DGDGRISRDELRRAMRAVGVRFTGIKCRRGMSHADADGDGYIDDSEIDGLI 91
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 31.1 bits (67), Expect = 0.32
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLI 145
D+ G I + LRH + D S DE+ + + D D G I+ + +
Sbjct: 544 DQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEFL 591
>01_07_0252 -
42296138-42296281,42296527-42296613,42297043-42297135,
42297267-42297341,42297480-42297575,42297987-42298133,
42298225-42298296,42298912-42298959,42299507-42299607,
42300226-42300337,42300506-42300590,42300693-42300848,
42300956-42301047,42301155-42301238,42301676-42301726,
42302227-42302295,42302417-42302476,42303305-42303535
Length = 600
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
+E+G++ + +G+K + ++ E + Q D + G +D +L A+L
Sbjct: 140 NEDGELSLSEFSDLMKAFGNKLAVAKIEELFRQADKNGDGIVDMDELAALL 190
>07_03_1288 + 25518522-25518797
Length = 91
Score = 30.3 bits (65), Expect = 0.56
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKL 142
D +G+I LR A+ G FS + A D D+ G++D +++
Sbjct: 27 DNDGRISRGELREAIRRRGGWFSGLKAGRAVRHADRDNSGFVDESEI 73
>05_01_0336 - 2656774-2656992,2657112-2657326,2657611-2657812
Length = 211
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
D G ID+E LR+ L + S +E+ + DID++ I + + L
Sbjct: 75 DSNGTIDNEELRNCLNKLQVQMSEEEIDNIHRYCDIDNRKGIQFPEFVVFL 125
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 29.9 bits (64), Expect = 0.74
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 186 KPRNDSISTIRSKTPAAVITPGHV 257
+ R D+ISTIRS TP AVI +V
Sbjct: 207 RERQDAISTIRSMTPGAVIMGDYV 230
>12_01_0249 + 1850443-1851030
Length = 195
Score = 29.5 bits (63), Expect = 0.97
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKF-SADEVHEAYDQMDIDDKGYI 127
D +G+I +E LR L + GD+ S D+ +D D G++
Sbjct: 139 DGDGRISAEELRAVLASLGDELCSVDDCRRMIGGVDTDGDGFV 181
>11_01_0250 + 1924261-1924848
Length = 195
Score = 29.5 bits (63), Expect = 0.97
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKF-SADEVHEAYDQMDIDDKGYI 127
D +G+I +E LR L + GD+ S D+ +D D G++
Sbjct: 139 DGDGRISAEELRAVLASLGDELCSVDDCRRMIGGVDTDGDGFV 181
>09_04_0399 + 17283968-17284264
Length = 98
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
D +G+I + LR A+ +F+ + D D GYID
Sbjct: 34 DRDGRISRDELRRAMRAIRARFTGWRSRQGISYADADGDGYID 76
>11_06_0304 - 22206490-22207065
Length = 191
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 59 DKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
D+ S DEV +A+ D D+ GYID L +L
Sbjct: 117 DEPSLDEVKQAFLVFDEDNDGYIDALDLYRVL 148
>10_08_0607 +
19168164-19168358,19168594-19168716,19168791-19168946,
19169129-19169314,19169467-19169583,19169721-19169774,
19169854-19169925,19170430-19170535,19170658-19170754,
19171090-19171184,19172318-19172420,19172699-19172886,
19174928-19175183,19177187-19177325
Length = 628
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 195 NDSISTIRSKTPAAVITPGHVHSD*TSPYE 284
ND ++ + K AAV+TP H + +SP+E
Sbjct: 102 NDYLAVLSKKFGAAVVTPEHRYYGKSSPFE 131
>08_01_0121 - 963297-963743
Length = 148
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D G + LRH L + G+K E E ++D+ G I I + A
Sbjct: 95 DASGTVSVADLRHVLTSIGEKLEPHEFDEWIREVDVAPDGTIRYDDFIRRIVA 147
>03_05_1090 +
30313176-30313292,30314162-30314236,30314938-30315181,
30315701-30315787,30315832-30315995,30316587-30316689,
30317751-30317908,30318025-30318105,30318192-30318344
Length = 393
Score = 27.1 bits (57), Expect = 5.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 74 DEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
+E+ EA++ +D D G+I T+L ++T
Sbjct: 322 EELKEAFEVLDKDQNGFISPTELRTVMT 349
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,129,917
Number of Sequences: 37544
Number of extensions: 126428
Number of successful extensions: 317
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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