Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0051
         (387 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)                  41   4e-04
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)             34   0.035
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)                34   0.047
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)                34   0.047
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.047
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)                   34   0.047
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)                33   0.11 
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)                31   0.33 
SB_20132| Best HMM Match : efhand (HMM E-Value=4.4e-11)                31   0.43 
SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08)            29   1.0  
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)                29   1.8  
SB_41606| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   3.1  
SB_978| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   4.0  
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   5.3  
SB_21451| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.3  
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)                  27   7.1  
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   7.1  
SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12)                 26   9.3  
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)                   26   9.3  
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)                  26   9.3  

>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
          Length = 171

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 17/51 (33%), Positives = 31/51 (60%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
           D  G+I  + L+ A+M+ GD+FS ++V +      ID +G++D +K   +L
Sbjct: 112 DGNGRIHEDLLKEAMMSMGDRFSDEQVDDILRDAPIDKEGFLDYSKFTRIL 162


>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
          Length = 153

 Score = 34.3 bits (75), Expect = 0.035
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 8   EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
           +G I    LR  + + G+K S DE+ E   + D+D  G I+  + + M+
Sbjct: 87  DGSISEWELRSVMASLGEKLSDDEIKEMMREADLDGDGVINFQEFVQMV 135


>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
          Length = 659

 Score = 33.9 bits (74), Expect = 0.047
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           D  G I +  LRH +   G+K + +EV E   + DID  G ++
Sbjct: 85  DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 127


>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
          Length = 250

 Score = 33.9 bits (74), Expect = 0.047
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           D  G I +  LRH +   G+K + +EV E   + DID  G ++
Sbjct: 85  DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 127


>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 299

 Score = 33.9 bits (74), Expect = 0.047
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           D  G I +  LRH +   G+K + +EV E   + DID  G ++
Sbjct: 96  DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138



 Score = 26.2 bits (55), Expect = 9.3
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   DEEGKID-SERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
           D  G ID  E L        D  S +E+ EA+   D D  G+I   +L  ++T
Sbjct: 59  DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111


>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
          Length = 213

 Score = 33.9 bits (74), Expect = 0.047
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           D  G I +  LRH +   G+K + +EV E   + DID  G ++
Sbjct: 60  DGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEADIDGDGQVN 102



 Score = 27.5 bits (58), Expect = 4.0
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   DEEGKID-SERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
           D  G ID  E L       G++ S +E+ EA+   D D  G+I   +L  ++T
Sbjct: 23  DGNGIIDFPEFLTMMAKKMGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMT 75


>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
          Length = 420

 Score = 32.7 bits (71), Expect = 0.11
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 8   EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           +G I S  L+  +   G++ + DEV E   + DID  G ID
Sbjct: 377 DGMISSSELKLVMSNLGERLTDDEVDEMIREADIDGDGMID 417


>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
          Length = 150

 Score = 31.1 bits (67), Expect = 0.33
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLI 145
           D  G I+   LRH L T G+K +  EV      ++ D +G ID  + I
Sbjct: 98  DGSGMINEGELRHILTTLGEKLTDSEVDSLIQGLE-DKQGQIDCEEFI 144


>SB_20132| Best HMM Match : efhand (HMM E-Value=4.4e-11)
          Length = 125

 Score = 30.7 bits (66), Expect = 0.43
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAY-DQMDIDDKGYIDTTKLIAML 154
           +++G ID   L   L   GD+ S   V EAY  Q+D+D+ G ID  + + ++
Sbjct: 34  NQDGVIDFSELMQVLDDLGDR-SDVSVREAYFHQIDMDNSGAIDFEEFLTLI 84


>SB_23830| Best HMM Match : Glyoxalase (HMM E-Value=4.1e-08)
          Length = 306

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 26  ERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYI 127
           ERL+HA +T  +  S DE+ +    +D DDKGY+
Sbjct: 226 ERLKHASITVTE--SIDELQKLKILVDFDDKGYL 257


>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
          Length = 146

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
           +  GKIDS   R  L   GDK + +E        +   KG +D  +LI  + A
Sbjct: 93  EANGKIDSGTFRGLLCNRGDKITEEEADAILAGHEDTVKGEVDYNELIDFVMA 145


>SB_41606| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1144

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYI 127
           DEE + D E          D +SA+E  + YD  D DD  Y+
Sbjct: 9   DEEYEDDEEYDDDYEYDESDSYSAEEFFDNYDDDDFDDSDYL 50


>SB_8599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 767

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 47  MTWGDKFSADEVHEAYDQMDIDDKGYIDTT 136
           MTW  +    E  +  D  DIDD G +D T
Sbjct: 218 MTWSPRNRCGEKKDGVDGSDIDDDGDLDIT 247


>SB_978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1045

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 10/46 (21%), Positives = 26/46 (56%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTK 139
           D E +++S+R +HA+ ++     +  +++ Y    +D  G+++  K
Sbjct: 718 DGEDELESQRYQHAVRSFTPYSQSRRMYKKYISYSLDRTGFVEFAK 763


>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 129

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
           D++G + +E L   +   G+ F+ +EV E        +KG I     +AM+
Sbjct: 74  DKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPEKGVIFYKDFVAMM 124


>SB_21451| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 272 CLIRVNVAGRDDCGWRLRPYSRDGIITRL 186
           C I +N+ G  DC W   PY   G+I  L
Sbjct: 43  CSININI-GPGDCEWFATPYEYWGVIHNL 70


>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
          Length = 910

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = +2

Query: 74  DEVHEAYDQMDIDDKGYIDTTKL 142
           D++ E +D +D+DD+G+ D+ ++
Sbjct: 144 DDLLEYFDNLDVDDRGHDDSHEI 166


>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 350

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 2   DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
           D  G I ++ ++  L   G   +  E  E   Q DID  G+I+
Sbjct: 229 DGNGLISAQEMKFVLTCMGFNITEKEAVELVKQADIDGDGHIN 271


>SB_8171| Best HMM Match : efhand (HMM E-Value=6.6e-12)
          Length = 77

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +2

Query: 77  EVHEAYDQMDIDDKGYIDTTKLIAMLTAS 163
           ++ E++D+ D+D  G+I   +L A+ +A+
Sbjct: 18  DLKESFDEFDVDHNGHITVKELGAVFSAA 46


>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
          Length = 998

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 272 CLIRVNVAGRDDCGWRLRPYSRD 204
           C +R++V GRD C   L  Y RD
Sbjct: 11  CTMRLSVYGRDVCTMGLSVYGRD 33



 Score = 26.2 bits (55), Expect = 9.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 272 CLIRVNVAGRDDCGWRLRPYSRD 204
           C + ++V GRD C  RL  Y RD
Sbjct: 131 CTMGLSVYGRDVCTMRLSVYGRD 153



 Score = 26.2 bits (55), Expect = 9.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 272 CLIRVNVAGRDDCGWRLRPYSRD 204
           C +R++V GRD C   L  Y RD
Sbjct: 143 CTMRLSVYGRDVCTMGLSVYGRD 165


>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
          Length = 69

 Score = 26.2 bits (55), Expect = 9.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 11 GKIDSERLRHALMTWGDKFSADEV 82
          G I +  LRH L + GDK S +EV
Sbjct: 20 GLIGAAELRHLLASLGDKLSDEEV 43


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,788
Number of Sequences: 59808
Number of extensions: 147679
Number of successful extensions: 375
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 375
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 669365910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)