Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0051
(387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 39 0.001
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 39 0.001
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 36 0.008
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 36 0.008
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 34 0.040
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 33 0.053
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 33 0.070
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 33 0.070
Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical pr... 29 0.86
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 27 6.1
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 27 6.1
Z83231-6|CAI46597.1| 373|Caenorhabditis elegans Hypothetical pr... 26 8.1
AL032647-8|CAI46617.1| 373|Caenorhabditis elegans Hypothetical ... 26 8.1
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
D G I + LRH + G+K + +EV E + DID G ++ + + M+T
Sbjct: 96 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 DEEGKID-SERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
D G ID E L D S +E+ EA+ D D G+I +L ++T
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
D G I + LRH + G+K + +EV E + DID G ++ + + M+T
Sbjct: 96 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147
Score = 26.2 bits (55), Expect = 8.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 2 DEEGKID-SERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLT 157
D G ID E L D S +E+ EA+ D D G+I +L ++T
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT 111
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D G I ++ R+ + GD+FS EV E ++DID G ID + + +A
Sbjct: 119 DGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 36.3 bits (80), Expect = 0.008
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
D G I ++ R+ + GD+FS EV E ++DID G ID + + +A
Sbjct: 119 DGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 33.9 bits (74), Expect = 0.040
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYI 127
D G I + LRH + G+K + +EV E + DID G I
Sbjct: 45 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQI 86
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.053
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 8 EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
+G+I + L AL+ G+K S ++ +Q D+D G ID + + +L
Sbjct: 21 DGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVL 69
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 8 EGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAML 154
+G I + L + G+K + E E Q D+D G ID + + ++
Sbjct: 94 DGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVNII 142
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.070
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
+E GKI + LRH L+ G++ SADE E ++ D +G + I + A
Sbjct: 95 EETGKILAAELRHILLALGERLSADEADELLKGVE-DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.070
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 2 DEEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKLIAMLTA 160
+E GKI + LRH L+ G++ SADE E ++ D +G + I + A
Sbjct: 95 EETGKILAAELRHILLALGERLSADEADELLKGVE-DGEGMVKYEDFIKKVLA 146
>Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical
protein B0513.5 protein.
Length = 616
Score = 29.5 bits (63), Expect = 0.86
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 5 EEGKIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYID 130
+EG++ S+ L G K + V + +D++D D G +D
Sbjct: 283 QEGRLTSQEFYKRLGELGVKTDTESVKKFFDEVDFDSDGIVD 324
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 14 KIDSERLRHALMTWGDKFSADEVHEAYDQMDIDDKGYIDTTKL 142
K +S L A++T+GD F+ V +DID ++ T KL
Sbjct: 34 KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 44 LMTWGDKFSADEVHE 88
L WGDK+S DE+ E
Sbjct: 625 LQLWGDKYSIDEIEE 639
>Z83231-6|CAI46597.1| 373|Caenorhabditis elegans Hypothetical
protein F57G9.7 protein.
Length = 373
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 254 RSLGLNITI*TKLFYFNFLHT**FIVSNFYLFIYNENI 367
+S +NIT+ +F F++ I+S F+LF Y E I
Sbjct: 60 QSFHINITLIYTVFMFHWFE---LIISRFFLFPYQEAI 94
>AL032647-8|CAI46617.1| 373|Caenorhabditis elegans Hypothetical
protein F57G9.7 protein.
Length = 373
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 254 RSLGLNITI*TKLFYFNFLHT**FIVSNFYLFIYNENI 367
+S +NIT+ +F F++ I+S F+LF Y E I
Sbjct: 60 QSFHINITLIYTVFMFHWFE---LIISRFFLFPYQEAI 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,963,730
Number of Sequences: 27780
Number of extensions: 114090
Number of successful extensions: 335
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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