Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0051
         (387 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   1.2  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   1.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   2.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   2.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.5  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 56  GDKFSADEVHEAYDQMDID 112
           G+ FS D+    YD +DID
Sbjct: 16  GEVFSEDKYTTKYDNVDID 34


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 56  GDKFSADEVHEAYDQMDID 112
           G+ FS D+    YD +DID
Sbjct: 16  GEVFSEDKYTTKYDNVDID 34


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 44  LMTWGDKFSADEVHEAYD 97
           L  W DKF  +E+   YD
Sbjct: 71  LQNWMDKFRGEEIAILYD 88


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 287 KLFYFNFLHT**FIVSNFYLFIYNENIV 370
           K F  NF  T  FI+ N+++F+Y  ++V
Sbjct: 5   KYFGKNFPSTS-FILINYFIFLYFNSLV 31


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 5   EEGKIDSERLRHALMTWGDKF 67
           E  KID   L+H +    D+F
Sbjct: 396 ESNKIDETTLKHLIDVASDRF 416


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 5   EEGKIDSERLRHALMTWGDKF 67
           E  KID   L+H +    D+F
Sbjct: 396 ESNKIDETTLKHLIDVASDRF 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,874
Number of Sequences: 438
Number of extensions: 1458
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)