Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0050
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 134 1e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 125 9e-28
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 124 1e-27
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 124 1e-27
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 123 3e-27
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 119 6e-26
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 119 6e-26
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 119 6e-26
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 119 7e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 115 1e-24
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 114 2e-24
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 114 2e-24
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 113 3e-24
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 111 1e-23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 109 5e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 105 1e-21
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 105 1e-21
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 102 7e-21
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 98 1e-19
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 3e-19
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 97 5e-19
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 96 6e-19
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 96 6e-19
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 93 7e-18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 92 1e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 86 6e-16
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 82 1e-14
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 82 1e-14
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 82 1e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 82 1e-14
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 81 2e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 81 3e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 81 3e-14
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 80 6e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 79 7e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 79 7e-14
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 79 7e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 7e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 77 3e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 77 4e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 75 2e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 2e-12
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 74 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 5e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 5e-12
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 73 6e-12
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 73 8e-12
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 72 1e-11
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 71 2e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 71 2e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 71 3e-11
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 71 3e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 70 4e-11
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 69 1e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 68 2e-10
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 68 2e-10
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 67 3e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 67 3e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 67 4e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 66 1e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 65 2e-09
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 65 2e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 65 2e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 64 2e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 2e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 64 3e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 64 4e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 63 7e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 9e-09
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 62 2e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 59 8e-08
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 58 1e-07
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 58 1e-07
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 57 3e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 57 3e-07
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 56 8e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 1e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 54 3e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 54 3e-06
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 54 4e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 53 5e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 5e-06
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 53 7e-06
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 52 1e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 52 1e-05
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 46 0.001
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 46 0.001
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 44 0.003
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 43 0.008
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 42 0.010
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 40 0.041
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 40 0.041
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 38 0.17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 38 0.17
UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1; Bolb... 38 0.29
UniRef50_Q9PQV6 Cluster: DNA-directed RNA polymerase subunit bet... 34 3.6
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 33 6.3
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 6.3
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 33 8.3
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 33 8.3
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 134 bits (325), Expect = 1e-30
Identities = 63/82 (76%), Positives = 73/82 (89%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA++AIGLLGF+V AHH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI
Sbjct: 187 IYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQIL 246
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
Y+P L LGFVFLFTVGGLTG
Sbjct: 247 YSPVTLWTLGFVFLFTVGGLTG 268
Score = 96.7 bits (230), Expect = 5e-19
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSSIDI LHDTYYVVAHFHYVLS +PLFTG++LN++ LKIQF
Sbjct: 269 VVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFI 328
Query: 434 TIFIGVNITFF 466
+FIGVN+TFF
Sbjct: 329 IMFIGVNLTFF 339
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 125 bits (302), Expect = 9e-28
Identities = 57/82 (69%), Positives = 72/82 (87%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A++AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I
Sbjct: 39 VWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIK 98
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++ +L LGF+FLFTVGGLTG
Sbjct: 99 WDTPMLWALGFIFLFTVGGLTG 120
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L++ KI F
Sbjct: 121 IILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFG 180
Query: 434 TIFI 445
+F+
Sbjct: 181 VMFM 184
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 124 bits (300), Expect = 1e-27
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A++AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I
Sbjct: 274 VWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIK 333
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L LGF+FLFTVGGLTG
Sbjct: 334 WETPMLWALGFIFLFTVGGLTG 355
Score = 116 bits (279), Expect = 5e-25
Identities = 54/85 (63%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSSIDI LHDTYYVVAHFHYVLS + +PLFTG +L+ KI F
Sbjct: 356 IVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFG 415
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+FIGVN+TFFPQHFLGLAG+PRRY
Sbjct: 416 VMFIGVNLTFFPQHFLGLAGMPRRY 440
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 124 bits (300), Expect = 1e-27
Identities = 57/82 (69%), Positives = 71/82 (86%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A++AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I
Sbjct: 274 VWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIK 333
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L LGF+FLFTVGGLTG
Sbjct: 334 WETPMLWALGFIFLFTVGGLTG 355
Score = 119 bits (287), Expect = 6e-26
Identities = 55/85 (64%), Positives = 64/85 (75%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS KI F
Sbjct: 356 IVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFG 415
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+FIGVN+TFFPQHFLGLAG+PRRY
Sbjct: 416 VMFIGVNLTFFPQHFLGLAGMPRRY 440
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 123 bits (297), Expect = 3e-27
Identities = 54/82 (65%), Positives = 72/82 (87%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A+++IG LGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ +
Sbjct: 274 VWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMK 333
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++ +L LGF+FLFTVGGLTG
Sbjct: 334 WSAAVLWALGFIFLFTVGGLTG 355
Score = 113 bits (272), Expect = 4e-24
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSS+DI LHDTYYVVAHFHYVLS + +PLF+G +L+ KI F
Sbjct: 356 IVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFT 415
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+FIGVN+TFFPQHFLGL+G+PRRY
Sbjct: 416 IMFIGVNLTFFPQHFLGLSGMPRRY 440
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 119 bits (287), Expect = 6e-26
Identities = 55/82 (67%), Positives = 68/82 (82%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA+L IG LGFIV AHH+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++
Sbjct: 258 IYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLM 317
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
N IL +GF+FLFTVGGLTG
Sbjct: 318 NNLMILWTMGFIFLFTVGGLTG 339
Score = 113 bits (271), Expect = 5e-24
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++L+NSS+D+ LHDTYY VAHFHYVLS +P+F GL +N Y LKI F+
Sbjct: 340 VVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFY 399
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
FIGVN+ FFPQHFLGL+G+PRRY
Sbjct: 400 LTFIGVNLIFFPQHFLGLSGMPRRY 424
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 119 bits (287), Expect = 6e-26
Identities = 52/82 (63%), Positives = 72/82 (87%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+ +IG+LGF+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G ++
Sbjct: 274 VYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLH 333
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ P++L LGFVF+FT+GGL+G
Sbjct: 334 FIPSLLFALGFVFMFTIGGLSG 355
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/87 (51%), Positives = 55/87 (63%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ ++LAN+S+DI HDTYYVVAHFHYVLS P GL N K
Sbjct: 353 LSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKA 412
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F+ +F GVN+TFFPQHFLGL G+PRR
Sbjct: 413 HFWVLFTGVNLTFFPQHFLGLQGMPRR 439
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 119 bits (287), Expect = 6e-26
Identities = 54/82 (65%), Positives = 70/82 (85%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+++IG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I
Sbjct: 276 VYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQ 335
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
Y +L +GF+FLFT+GGLTG
Sbjct: 336 YKTPMLFAVGFIFLFTIGGLTG 357
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/84 (50%), Positives = 52/84 (61%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANS +DI LHDTYYVVAHFHYVLS G + + +I F+
Sbjct: 358 IVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFW 417
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
F GVN+TFFP HFLGL+G+PRR
Sbjct: 418 ITFFGVNLTFFPMHFLGLSGMPRR 441
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 119 bits (286), Expect = 7e-26
Identities = 53/82 (64%), Positives = 70/82 (85%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA++AIG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ + LGFVFLFT+GGLTG
Sbjct: 311 WETPLFWALGFVFLFTLGGLTG 332
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/68 (44%), Positives = 40/68 (58%)
Frame = +2
Query: 203 FMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YP 382
F + F + ++LANSSID+ LHDTYYVVAHFHYVLS + +P
Sbjct: 316 FWALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFP 375
Query: 383 LFTGLSLN 406
LF+G +L+
Sbjct: 376 LFSGYNLH 383
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 115 bits (276), Expect = 1e-24
Identities = 53/85 (62%), Positives = 62/85 (72%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS K F
Sbjct: 357 IVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNSAWAKAHFG 416
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+F GVN+TFFPQHFLGLAG+PRRY
Sbjct: 417 VMFTGVNLTFFPQHFLGLAGMPRRY 441
Score = 53.2 bits (122), Expect = 5e-06
Identities = 32/82 (39%), Positives = 40/82 (48%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A+L+IG LGFIV A LAT+HG I
Sbjct: 275 VWAMLSIGFLGFIVWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIK 334
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++P +L LGF+FLFTVGGLTG
Sbjct: 335 WDPPMLWALGFIFLFTVGGLTG 356
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 114 bits (275), Expect = 2e-24
Identities = 50/82 (60%), Positives = 70/82 (85%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+++IGLLGFIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G ++
Sbjct: 300 VYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLH 359
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L LGFV +FT+GGL+G
Sbjct: 360 FTTPMLFALGFVVMFTIGGLSG 381
Score = 97.1 bits (231), Expect = 3e-19
Identities = 46/87 (52%), Positives = 58/87 (66%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ ++LAN+S +I HDTYYVVAHFHYVLS P GLS ++ KI
Sbjct: 379 LSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKI 438
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F+ +FIGVN+TFFPQHFLGL G+PRR
Sbjct: 439 HFWILFIGVNLTFFPQHFLGLQGMPRR 465
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 114 bits (274), Expect = 2e-24
Identities = 53/82 (64%), Positives = 69/82 (84%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+++IG+LGFIV AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+
Sbjct: 281 VYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIH 340
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+L +GF+FLFT+GGLTG
Sbjct: 341 LKTPMLFAIGFIFLFTIGGLTG 362
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/84 (53%), Positives = 56/84 (66%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANS +DI+LHDTYYVVAHFHYVLS + TGL + +I F+
Sbjct: 363 IVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFW 422
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+ FIGVN+TF P HFLGLAG+PRR
Sbjct: 423 STFIGVNLTFMPMHFLGLAGMPRR 446
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 113 bits (273), Expect = 3e-24
Identities = 52/85 (61%), Positives = 62/85 (72%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 357 IVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHFG 416
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+F GVN+TFFPQHFLGLAG+PRRY
Sbjct: 417 VMFTGVNLTFFPQHFLGLAGMPRRY 441
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +3
Query: 72 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 251
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 252 G 254
G
Sbjct: 356 G 356
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 111 bits (267), Expect = 1e-23
Identities = 50/82 (60%), Positives = 67/82 (81%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+ +IG+LGF+V +HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G +
Sbjct: 273 VYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLR 332
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+L LGF+ LFT+GGLTG
Sbjct: 333 ITTPMLFALGFIALFTIGGLTG 354
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 109 bits (263), Expect = 5e-23
Identities = 52/82 (63%), Positives = 66/82 (80%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+ +IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I
Sbjct: 274 VYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIR 333
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++ + F+FLFTVGGLTG
Sbjct: 334 LAVPMMFAIAFLFLFTVGGLTG 355
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 105 bits (251), Expect = 1e-21
Identities = 46/81 (56%), Positives = 66/81 (81%)
Frame = +3
Query: 12 YAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 191
YA++AIG++GF+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++
Sbjct: 317 YAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISF 376
Query: 192 NPNIL*RLGFVFLFTVGGLTG 254
++ LGF+FLFTVGG+TG
Sbjct: 377 KTPMVWALGFIFLFTVGGVTG 397
Score = 95.1 bits (226), Expect = 1e-18
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ ++LAN +D LHDTYYVVAHFHYVLS +P +G N ++ ++
Sbjct: 395 VTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQL 454
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+ F GVN+ FFP HFLGL+G+PRRY
Sbjct: 455 HFWVFFAGVNLLFFPMHFLGLSGMPRRY 482
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 105 bits (251), Expect = 1e-21
Identities = 52/82 (63%), Positives = 66/82 (80%), Gaps = 2/82 (2%)
Frame = +3
Query: 15 AILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-- 188
A+LAIG+LGFIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 241 AMLAIGVLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLI 300
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ + LGF+FLFT+GGLTG
Sbjct: 301 FTTPMAWALGFIFLFTIGGLTG 322
Score = 100 bits (239), Expect = 4e-20
Identities = 47/85 (55%), Positives = 57/85 (67%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++L+NSS+DI LHDTYYVVAHFHYVLS + TG + I F+
Sbjct: 323 IVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLIHFW 382
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
+F+GVNITFFPQHFLGLAG+PRRY
Sbjct: 383 LMFLGVNITFFPQHFLGLAGLPRRY 407
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 102 bits (245), Expect = 7e-21
Identities = 45/82 (54%), Positives = 64/82 (78%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA+ +IG LGF V +HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G +
Sbjct: 291 IYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLR 350
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L +GF+ LFT+GG+TG
Sbjct: 351 WTTPLLYAVGFIVLFTIGGVTG 372
Score = 37.1 bits (82), Expect = 0.39
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 212 IRFCIFIHSRRINRLILANSSIDITLHDTYYVVA 313
+ F + + +++ANSS+DI HDTYYVVA
Sbjct: 359 VGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 98.3 bits (234), Expect = 1e-19
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +3
Query: 78 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 254
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTG
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTG 59
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/79 (37%), Positives = 38/79 (48%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 60 VVLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIF 119
Query: 434 TIFIGVNITFFPQHFLGLA 490
FP FL ++
Sbjct: 120 NNIFSCKFNIFPPTFLSIS 138
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +3
Query: 81 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 245
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 37.1 bits (82), Expect = 0.39
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3
Query: 420 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIRL 515
KFN Y LE I HF HNIF EYLDDI++
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQI 146
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI- 185
+ A+L IGL+GFIV AHH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I
Sbjct: 277 IAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIW 336
Query: 186 NYNPNIL*RLGFVFLFTVGGLTG 254
Y P GFV LFT+GG+TG
Sbjct: 337 MYTPMYF-AAGFVVLFTIGGITG 358
Score = 87.0 bits (206), Expect = 4e-16
Identities = 45/104 (43%), Positives = 58/104 (55%)
Frame = +2
Query: 194 P*YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 373
P YF F + I +IL+N+ ID ++HDT+YVV HFHYVLS
Sbjct: 340 PMYFAA-GFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYY 398
Query: 374 *YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 505
+ TGLS + + + F+ FIGVN TFFP HFLG G+PRR
Sbjct: 399 WWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGSGGMPRR 442
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA++AIG LGF+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I+
Sbjct: 379 VYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSIS 438
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ ++ LGF+FLFT+GG TG
Sbjct: 439 FKTPMMFALGFIFLFTLGGTTG 460
Score = 82.6 bits (195), Expect = 8e-15
Identities = 38/85 (44%), Positives = 49/85 (57%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+IL+ + +D HDTYYVVAHFHYV+S +G + ++ F+
Sbjct: 461 IILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHFW 520
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
FIG NITFFPQHFLG G+PRRY
Sbjct: 521 VFFIGTNITFFPQHFLGRQGMPRRY 545
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.3 bits (229), Expect = 6e-19
Identities = 44/64 (68%), Positives = 53/64 (82%)
Frame = +3
Query: 57 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 236
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 237 VGGL 248
+GGL
Sbjct: 409 IGGL 412
Score = 68.1 bits (159), Expect(2) = 1e-15
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +2
Query: 293 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 472
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 473 HFLGLAGIPRR 505
HFLGL G+PRR
Sbjct: 536 HFLGLQGMPRR 546
Score = 37.9 bits (84), Expect(2) = 1e-15
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 239 RRINRLILANSSIDITLHDTYYVVA 313
R ++ ++LAN+S+DI HDTYYVVA
Sbjct: 424 RFVSGVVLANASLDIAFHDTYYVVA 448
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 92.7 bits (220), Expect = 7e-18
Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Frame = +3
Query: 12 YAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQ 182
+A + I +GF+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G +
Sbjct: 278 WASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSL 337
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
+ +P+ +G V LFT+GGLTG
Sbjct: 338 KHSHPSTFWAIGVVLLFTIGGLTG 361
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/86 (47%), Positives = 54/86 (62%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+ILAN+++ LHD+YYVVAHFHYVLS +P +TG+ ++ F
Sbjct: 362 VILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLTHFM 421
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRYQ 511
FIGVN TFFP H++GL G+PRRYQ
Sbjct: 422 LTFIGVNFTFFPMHWMGLTGMPRRYQ 447
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 91.9 bits (218), Expect = 1e-17
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +3
Query: 99 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 254
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTG
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTG 148
Score = 42.7 bits (96), Expect = 0.008
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2
Query: 8 SLCYTSNWVIRIYCLSSSYIH 70
+LCY SNW+I IYCLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 86.2 bits (204), Expect = 6e-16
Identities = 39/87 (44%), Positives = 53/87 (60%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ +IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S ++
Sbjct: 363 LSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMA 422
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F F+G N+TFFP HF GL G+PR+
Sbjct: 423 VFVCFFVGTNMTFFPMHFAGLQGMPRK 449
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = +3
Query: 12 YAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 191
+A + I +LG V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+
Sbjct: 285 FASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKM 344
Query: 192 NPNIL*RLGFVFLFTVGGLTG 254
P F+FLFTVGGL+G
Sbjct: 345 QPLWCWTYSFIFLFTVGGLSG 365
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/96 (42%), Positives = 56/96 (58%)
Frame = +2
Query: 218 FCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 397
F IFI ++ +++A+ D+ HDTY+VVAHFHYVL YP FTG
Sbjct: 366 FLIFIIGG-LSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGR 424
Query: 398 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 505
++ + K+ F+ F G N+TFFP H LGL G+PRR
Sbjct: 425 MMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRR 460
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/82 (39%), Positives = 55/82 (67%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V +I+AIG +GF + HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 295 VLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPK 354
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+L LGF +F +GGL+G
Sbjct: 355 LATPLLHVLGFFLIFIIGGLSG 376
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA+ +IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N
Sbjct: 274 VYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKN 333
Query: 189 YNPN 200
N N
Sbjct: 334 KNKN 337
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 81.8 bits (193), Expect = 1e-14
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ +IL N+++DI LHDTYYVVAHFH V+ + +P G ++ + I
Sbjct: 414 VTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYI 473
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+ F+G + FFP H++G+AG PRRY
Sbjct: 474 HFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/84 (38%), Positives = 50/84 (59%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A + +IL I +L FIV AHH+F G++ + F T+IIAVP+ +K F + T+
Sbjct: 333 AMIGSILGIAVLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGN 392
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
I + P ++ +G V +F GG+TG
Sbjct: 393 IIFTPAMMFSIGLVSMFISGGVTG 416
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 81.8 bits (193), Expect = 1e-14
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ + L+ S++DI HDT++VVAHFHYVLS +P G SLN Y+L+
Sbjct: 444 VTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQG 503
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
+ +G N+ FFP H+LG+ G+PRR
Sbjct: 504 HWLLSMVGFNLCFFPMHYLGIHGLPRR 530
Score = 72.1 bits (169), Expect = 1e-11
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+ A+ +I LG +V HH+F VG D T +F+S T+II VPTGIK+F L ++ +
Sbjct: 364 ICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMR 423
Query: 189 -YNPNIL*RLGFVFLFTVGGLTG 254
+P + +GF+FLFTVGG+TG
Sbjct: 424 VLDPIVWWLVGFIFLFTVGGVTG 446
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/81 (45%), Positives = 57/81 (70%)
Frame = +3
Query: 12 YAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 191
Y+ +AIG LGF+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N
Sbjct: 292 YSGVAIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNL 351
Query: 192 NPNIL*RLGFVFLFTVGGLTG 254
++L +GF+ +F +GG++G
Sbjct: 352 TTSMLYAIGFISMFIIGGISG 372
Score = 68.5 bits (160), Expect = 1e-10
Identities = 35/87 (40%), Positives = 48/87 (55%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
I+ + LA+ I++ D+YYVVAH HYVL +P TG L+ + K
Sbjct: 370 ISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKW 429
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
QF+ + I N+TFFP H G AG+PRR
Sbjct: 430 QFWLMLISFNLTFFPMHLSGNAGMPRR 456
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/82 (45%), Positives = 56/82 (68%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA AI +LGF+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++
Sbjct: 318 IYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLR 377
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ IL LGF+ F++GG+TG
Sbjct: 378 FETPILWTLGFMVTFSIGGMTG 399
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LA D LH++ +++AHFH + +P G LN + K F+
Sbjct: 400 VLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKASFW 459
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
IG F P + LG G+ RR
Sbjct: 460 FWQIGFMFAFMPLYVLGFLGMTRR 483
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 80.6 bits (190), Expect = 3e-14
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQI 185
V A+ +I L+G +V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++
Sbjct: 257 VLAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRM 316
Query: 186 NYNPNIL*RLGFVFLFTVGGLTG 254
N ++ F+ F +GG +G
Sbjct: 317 TLNSLTFLQVSFIVSFAIGGTSG 339
Score = 59.3 bits (137), Expect = 8e-08
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +2
Query: 203 FMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YP 382
F+++ F + + +IL+N+S+D LHDTYYVVAHFH V++ Y
Sbjct: 323 FLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YY 379
Query: 383 LFTGLSLNSYILKIQFFTIFIGVNITFFP-QHFLGLAGIPRRY 508
L + LSL + + ++F+ + + F QHF G + +PRRY
Sbjct: 380 LSSYLSLPFSLPLSGYASLFVFSSFSVFALQHFQGYSAMPRRY 422
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 79.8 bits (188), Expect = 6e-14
Identities = 38/97 (39%), Positives = 51/97 (52%)
Frame = +2
Query: 218 FCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 397
F I + + L L N +D+ L DT +VVAHFH V+ + YP TG
Sbjct: 383 FIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGR 442
Query: 398 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 508
LN + K F+ F+G + FFP H+LGL G+PRRY
Sbjct: 443 MLNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRRY 479
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+AI+AIG L F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ I+
Sbjct: 313 VWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIH 372
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+L LGF+ F GGLTG F
Sbjct: 373 LTVPMLFALGFIITFVNGGLTGLF 396
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V++ IG +GF V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI
Sbjct: 293 VFSTALIGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIR 352
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L +GF+ FT+GGL+G
Sbjct: 353 FTAAMLFAIGFIASFTIGGLSG 374
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = +2
Query: 278 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 457
D HDTY+VVAHFHYVL + +P G L+ + + F IF G +
Sbjct: 383 DAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHT 442
Query: 458 TFFPQHFLGLAGIPRR 505
FP H LGL G+PRR
Sbjct: 443 FAFPFHILGLLGMPRR 458
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ + +A +D+ HDTY++VAHFHY+L +P G +N + K
Sbjct: 404 LSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKT 463
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F FIG N TFFP HFLG+ G+PRRY
Sbjct: 464 HFVLTFIGANGTFFPMHFLGMQGMPRRY 491
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/84 (41%), Positives = 53/84 (63%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+++ AI LGFIV HH+FT G++ F +T++IA+P+ IK F ATI G ++
Sbjct: 325 VFSMSAIASLGFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLE 384
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+N L + F+ +F VGGL+G F
Sbjct: 385 FNTVTLNCIAFLSMFIVGGLSGIF 408
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 79.4 bits (187), Expect = 7e-14
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VYA++AI ++G+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + +
Sbjct: 31 VYAMIAIAVVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALA 90
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ + F+ +F +GG+TG
Sbjct: 91 SSAAWY-VVAFLLMFLLGGVTG 111
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ L+LANS +D+ +HD+YYVVAHFHYVLS + + L +G +++L++
Sbjct: 109 VTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRV 168
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
Q + G F+ H G G+PRR
Sbjct: 169 QVVLLVWGTTCIFWGMHLSGTLGLPRR 195
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+AI+ IG LGF+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G +
Sbjct: 282 VFAIVLIGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVK 341
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
Y +L + F+ F +GG+TG
Sbjct: 342 YTTAMLYAVSFIPSFVLGGVTG 363
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ ++LA ++ D HDTY+VVAHFHYV+ +P G L+ + KI
Sbjct: 361 VTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKI 420
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F FIG ++TFF QHF+GL G+PRR
Sbjct: 421 SFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/84 (48%), Positives = 52/84 (61%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A Y+ LAI LG IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +
Sbjct: 282 AIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGK 341
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
I N +L GF+ F +GGLTG
Sbjct: 342 IQLNSAMLFAFGFLSSFMIGGLTG 365
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A+ DI +HDTY+VV HFHYVL + +P TG +N + ++ F
Sbjct: 366 VMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFI 425
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
FIG+N+TF P H LGL G+ RR
Sbjct: 426 LTFIGMNLTFMPMHELGLMGMNRR 449
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 77.0 bits (181), Expect = 4e-13
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA AI +LGF V HH FT+G +F AT++I++PTG+K+F L TI+ ++
Sbjct: 317 IYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLR 376
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ I+ LGF+ F++GG+TG
Sbjct: 377 FTAPIMWTLGFMITFSIGGMTG 398
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/84 (29%), Positives = 38/84 (45%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LA D LH++ +V+AHFH V+ +P G +LN K F+
Sbjct: 399 VLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAFW 458
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
G + F P + LG G+ RR
Sbjct: 459 FWISGFYVAFMPLYALGFMGMTRR 482
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/107 (35%), Positives = 54/107 (50%)
Frame = +2
Query: 200 YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 379
+ I F + + +++A+ D +HDTY+VVAHFHYVL +
Sbjct: 353 FLFVIGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWF 412
Query: 380 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYQIIQ 520
P TG ++ + + F IF G N+TFFP H LGL G+PRR Q
Sbjct: 413 PKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILGLQGMPRRIYTYQ 459
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A V A++A G+L F + HH+F G+ ++FT++++ IAVP G++IF LATI +
Sbjct: 287 AMVMALIATGVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGR 346
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
+ L +GF+ +F +GGLTG
Sbjct: 347 PIFKTPFLFVIGFIVVFVIGGLTG 370
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A+ AI + F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I+
Sbjct: 229 VFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIH 288
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L LG VF+F +GGLTG
Sbjct: 289 FRSQMLYALGGVFMFLIGGLTG 310
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/85 (37%), Positives = 44/85 (51%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
L L +ID+ + D+ +VV HFHYVL + +PL TG + K+ F+
Sbjct: 311 LPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFW 370
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
IF G NI +F Q G+ G PRRY
Sbjct: 371 LIFAGANIFYFLQMVAGMLGNPRRY 395
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQI 185
+Y I++IG++G+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G
Sbjct: 283 MYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGF 342
Query: 186 NYNPNIL*RLGFVFLFTVGGLTG 254
N + F+ F GG TG
Sbjct: 343 RGNNSSWSFFSFLICFCFGGFTG 365
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
L+L++ S+DI LHDTY+VV HFH VLS P+ S+ F
Sbjct: 366 LLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESFSFYHTF 425
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+ +G + F+P H GL+G+ RR
Sbjct: 426 LLLVGALLVFYPMHLAGLSGMARR 449
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+ A+ I +LG +V HH++T G+++DTRAYFTS TI+I++PTG K+F + T +
Sbjct: 279 ILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFG 338
Query: 189 -YNPNIL*RLGFVFLFTVGGLTG 254
+ + L L F+ FT GG TG
Sbjct: 339 MIHSSSLLSLLFICTFTFGGTTG 361
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQF 430
+IL N++ID+ LHDTYYV+AHFH+VLS F G +L + I+ +
Sbjct: 362 VILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILWS 421
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
F+GV +TF P HFLG +PRR
Sbjct: 422 MLFFVGVILTFLPMHFLGFNVMPRR 446
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ + LA+ +D+ LH TYYVV HFHY++ +PL+TG + K+
Sbjct: 437 VTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKM 496
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+ IG NITFF LG G+PRRY
Sbjct: 497 HFWLSMIGTNITFFAMILLGYGGMPRRY 524
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VY+ LAIG+L F V AHH+F G+D RA F + ++ IAVP+ +K F + T+ I
Sbjct: 358 VYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIR 417
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+L +GFV F +GG+TG F
Sbjct: 418 LTTPMLFSVGFVANFILGGVTGVF 441
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 73.3 bits (172), Expect = 5e-12
Identities = 37/87 (42%), Positives = 49/87 (56%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ ++LA ++ D H+TY++V+HFHYVL YP G LN I K
Sbjct: 392 VTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKW 451
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F+ IG NI FFPQ+FLGL G+PRR
Sbjct: 452 FFWIFMIGFNICFFPQYFLGLQGMPRR 478
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A V +I+AI +L F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +
Sbjct: 311 AMVGSIIAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGR 370
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
I++ +L L F+ F +GG+TG
Sbjct: 371 ISFTTPMLWALAFIPNFVIGGVTG 394
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 72.9 bits (171), Expect = 6e-12
Identities = 32/86 (37%), Positives = 55/86 (63%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A +Y+++ I +LG V AHH+F VG+D+D+RAYF +I+I +PT +K+F + + T
Sbjct: 274 AMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTD 333
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG*F 260
+ + + F+F+F +G +TG F
Sbjct: 334 MIITFEVYFVIMFIFMFLIGAVTGLF 359
Score = 70.9 bits (166), Expect = 3e-11
Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +2
Query: 200 YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 379
YF+ I F + L L+N IDI LHDTY+VV HFHYVLS +
Sbjct: 341 YFV-IMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--H 397
Query: 380 PLFTGLSLNSYILKIQFF--TIFIGVNITFFPQHFLGLAGIPRR 505
L L + Y+ + +F T+FIG N+ FFP H LG+ PRR
Sbjct: 398 FLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRR 441
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 72.5 bits (170), Expect = 8e-12
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = +3
Query: 21 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 200
+AI LLG+ V AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N +
Sbjct: 296 VAIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTS 355
Query: 201 IL*RLGFVFLFTVGGLTG 254
+ + F+ F +GGLTG
Sbjct: 356 LHFAVAFLLQFVIGGLTG 373
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/84 (45%), Positives = 47/84 (55%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++ A ID L DTY+VVAHFHYVL +P TG LN I +QF+
Sbjct: 374 IMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQFW 433
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+G N+TF QHFLGL G+PRR
Sbjct: 434 LWVLGFNMTFMVQHFLGLMGMPRR 457
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ +++A ID +HDTY+VVAHFHYVL P F+ L+ + +
Sbjct: 380 VTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLGRW 439
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F+ +FIG N+TFFP H GL G+PRR
Sbjct: 440 VFWLMFIGFNVTFFPMHMAGLLGMPRR 466
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/85 (37%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V A++ G F + HH+FT GI + +F++A++ +A+P+GI++F +ATI ++
Sbjct: 299 VVALIGTGFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKER 358
Query: 189 Y---NPNIL*RLGFVFLFTVGGLTG 254
+ P++ LGF+F+FTVGG+TG
Sbjct: 359 FRITTPSLF-VLGFLFIFTVGGVTG 382
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ + +A + +DI +HDTY++VAHFHYVL +P G +N KI
Sbjct: 401 LSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKI 460
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F FI +N TFF H LG+ G PRR
Sbjct: 461 HFALTFIFLNGTFFTMHILGVGGFPRR 487
Score = 70.1 bits (164), Expect = 4e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VY+I I LGFIV HH+F G++ F AT++IA+P+ +K F L T++G ++
Sbjct: 322 VYSICGIAGLGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQ 381
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+ +L L FV +F +GGL+G F
Sbjct: 382 FTTPMLFALSFVSMFVIGGLSGIF 405
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/94 (44%), Positives = 48/94 (51%)
Frame = +2
Query: 161 SYNTWNSN*L*P*YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXX 340
SY + N N P FM IH + +ILANSS DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 341 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 442
+PLFTGL+L I F I+
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 39.1 bits (87), Expect = 0.096
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +1
Query: 418 KNSIFYNIYWSKYNIFSTTFFRFSWNT 498
KN+IF IYWSK+NIFS+T S NT
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNT 354
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VY++LAI L+ IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 291 VYSMLAIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRIL 350
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+GF+F F +GG+TG
Sbjct: 351 MRMPTYWLIGFIFNFLIGGITG 372
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/71 (39%), Positives = 37/71 (52%)
Frame = +2
Query: 296 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 475
+YYVVAHFH V+ +P TG L+ + F+ IG +TF PQ+
Sbjct: 387 SYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQY 446
Query: 476 FLGLAGIPRRY 508
LGL G+PRRY
Sbjct: 447 ILGLLGMPRRY 457
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQF 430
+IL N +ID+ LHDTYYV+AHFH+VLS F G +L + I+ +
Sbjct: 66 VILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIVLWS 125
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
F+GV +TF P HFLG +PRR
Sbjct: 126 ILFFVGVVLTFLPMHFLGFNVMPRR 150
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 236
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 237 VGGLTG 254
GG TG
Sbjct: 60 FGGTTG 65
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
VY+ LAIG+L F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++
Sbjct: 327 VYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLR 386
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+L +GFV F +GG+TG F
Sbjct: 387 LTAPMLFCIGFVQNFIIGGVTGVF 410
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
+ + LA ID+ LHDTYYVV HFH+++ +P+ TG +
Sbjct: 406 VTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHA 465
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+T +G N TF +LG G+PRRY
Sbjct: 466 HFWTALVGSNATFLAMLWLGYGGMPRRY 493
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ ++ A +D L DTY+VVAH HYVL +P FTG +N K+
Sbjct: 388 VSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKL 447
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F+ + +G N+ FFP H GL G+PRR
Sbjct: 448 TFWVVLVGFNLGFFPMHISGLLGMPRR 474
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +3
Query: 21 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 200
+A L+GF V HH+F GI A+F +A+++I++P+ + +F +ATI + +
Sbjct: 313 VATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTP 372
Query: 201 IL*RLGFVFLFTVGGLTG 254
L GFV +F VGG++G
Sbjct: 373 FLYFAGFVLMFVVGGVSG 390
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/88 (39%), Positives = 45/88 (51%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
++ LA SIDI LH TY+VV HFH V+ +P TG +N + KI
Sbjct: 400 VSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKI 459
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+ FIG F P H+LG+ G RRY
Sbjct: 460 HFWGTFIGAYCIFMPFHYLGMVGNVRRY 487
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/82 (30%), Positives = 49/82 (59%)
Frame = +3
Query: 15 AILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 194
++++IG L ++V HH+F G++ + F+ T+II +P + L +++G+++ N
Sbjct: 323 SMISIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRIN 382
Query: 195 PNIL*RLGFVFLFTVGGLTG*F 260
L LGF+ +F GG++G F
Sbjct: 383 SASLFALGFISMFVSGGVSGFF 404
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V A AIG + + V HH FT+G +F++AT+++ +PTG+K+F T+ ++
Sbjct: 336 VIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLR 395
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ P +L LG +FL VGGLTG
Sbjct: 396 FEPPMLWALGALFLLLVGGLTG 417
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/107 (24%), Positives = 50/107 (46%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LA +I+ T+H++ +VVAHFH ++ +P G L++ + F+
Sbjct: 418 MMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPSARANFW 476
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRYQIIQTHIFHEI*FLH*VHIFLY 574
+ +G + F LGL G+ RR + + + + + IF Y
Sbjct: 477 SFSVGTVLVFGAMFALGLMGMTRRLDYLSNPGYEPLLIVEEIGIFFY 523
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A + D +HDTY++VAH HY L YP+ T +L+ + + F+
Sbjct: 397 VMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWSFW 456
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRYQIIQTHI 529
+F G N+TF P H GL G+PRR H+
Sbjct: 457 LLFTGFNVTFLPMHLTGLKGMPRRVFTYPGHV 488
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/82 (32%), Positives = 48/82 (58%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V + + G L F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++
Sbjct: 315 VLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVK 374
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+L G + +FT GGLTG
Sbjct: 375 MILPMLWIAGGLAVFTAGGLTG 396
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A ++I L F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I
Sbjct: 337 VWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIR 396
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++ ++ L F+FLF +GG+TG
Sbjct: 397 FSVPMIYSLAFIFLFVIGGITG 418
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/87 (31%), Positives = 42/87 (48%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
I ++LAN +D +H+T ++VAHFH ++ +P G L+ +I
Sbjct: 416 ITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERWGRI 475
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
+ G FFP + LGL G+PRR
Sbjct: 476 SAYCWIFGWMGAFFPLYILGLMGLPRR 502
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A + I +LG +V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++
Sbjct: 283 VWAQMGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQ 342
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ LGF+F F +GG+TG
Sbjct: 343 MKTPLYWVLGFIFNFLLGGITG 364
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/88 (34%), Positives = 47/88 (53%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
I ++L+ + +D HD+Y+VVAHFH VL +P TG + + ++
Sbjct: 362 ITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRL 421
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
F+ +G +TF PQ+ LG G+PRRY
Sbjct: 422 HFWLFLVGYLLTFLPQYALGYLGMPRRY 449
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
I ++LA IDI + +TY+VVAHFHYV+ + +P FTG + K+
Sbjct: 378 ITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKV 437
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRR 505
F FIG + + P H+ GL G+PRR
Sbjct: 438 HFVLTFIGATLNWLPLHWAGLLGMPRR 464
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 RVYAILAIGL--LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 179
R AI + G+ L IV AHH+F G R F T++IA+PTG+K+F L T+
Sbjct: 296 RFVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAG 355
Query: 180 QINYNPNIL*RLGFVFLFTVGGLTG 254
+ N +L +G + F G+TG
Sbjct: 356 NLRLNTPMLFCIGGLINFIFAGITG 380
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 54 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 230
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 231 FTVGGLTG 254
FT+GG TG
Sbjct: 62 FTLGGTTG 69
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN--------S 409
+++ N+ +DI LHDTYY+VAHFH+VLS G +LN S
Sbjct: 70 VVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLFHVNTGSS 129
Query: 410 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 505
L I F + + F P H LG +PRR
Sbjct: 130 PYLNIWFVVFLASIMLIFLPMHILGFNVMPRR 161
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/83 (39%), Positives = 45/83 (54%)
Frame = +2
Query: 260 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTI 439
LA S+ + L +TYYVV HFHYV++ +P TG N I K F+
Sbjct: 358 LALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWIT 417
Query: 440 FIGVNITFFPQHFLGLAGIPRRY 508
F+GVNI F+ +G+ G+PRRY
Sbjct: 418 FVGVNIVFWIMMDIGVEGMPRRY 440
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +3
Query: 27 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 206
I LL V HH++ G+ R T++I++P G+ + + T++G I++ +L
Sbjct: 280 IVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPML 339
Query: 207 *RLGFVFLFTVGGLTG 254
LGF+FLF +GGLTG
Sbjct: 340 YALGFIFLFLIGGLTG 355
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +3
Query: 21 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 200
+AI + F V HH+FT D R AT+ +A+P+G+K+F +AT++G +I
Sbjct: 287 VAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAP 346
Query: 201 IL*RLGFVFLFTVGGLTG*F*P 266
+L L F+ F VGG+TG F P
Sbjct: 347 MLFMLTFLLFFIVGGVTGVFFP 368
Score = 49.6 bits (113), Expect = 7e-05
Identities = 30/110 (27%), Positives = 50/110 (45%)
Frame = +2
Query: 194 P*YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 373
P FM + F +F + + ++D+ LHDTY+V+ HFHY+++
Sbjct: 346 PMLFM-LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY 404
Query: 374 *YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYQIIQT 523
+P TG + + +I + I +G T+ G+ G PRRY T
Sbjct: 405 -FPHLTGRWYDERLARISWALITVGGFATYTLMSAAGVLGSPRRYAAAPT 453
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/85 (35%), Positives = 48/85 (56%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
++LA+ +D L D+Y+++AHFHY L +P TG ++ + KI F+
Sbjct: 378 IMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFW 437
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
F+G + TF QH++G G+PRRY
Sbjct: 438 LTFVGFHGTFLIQHWVGNMGMPRRY 462
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
++A L+IG L V AHH+F G + +F+ T +I+VPTG+K F + T+ I
Sbjct: 298 IFATLSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHIT 355
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ ++ +GF+ F GGLTG
Sbjct: 356 WETPMIWSVGFMATFLFGGLTG 377
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A D HD+Y++VAH HYVL P + +L+ + + F
Sbjct: 444 VMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERLGRWVFG 503
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+F+G NITFFP HF GLAG+PRR
Sbjct: 504 LMFVGFNITFFPMHFTGLAGMPRR 527
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGT-- 179
V A++ L F + HH+FT GI + ++F +A+ +A+P+G+++F +AT G
Sbjct: 358 VLALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRAT 417
Query: 180 -QINYNPNIL*RLGFVFLFTVGGLTG 254
++ L LGF+F+F +GGLTG
Sbjct: 418 GRVRIATPTLFILGFLFIFVLGGLTG 443
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+YA ++I +L F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI +
Sbjct: 312 IYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFK 371
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ + F+ +F++GG +G
Sbjct: 372 KDILFFWFISFIIIFSIGGFSG 393
Score = 50.0 bits (114), Expect = 5e-05
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 200 YFMKIRFCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 379
+F I F I + +IL+ ++D H++ +++AHFH V+ Y
Sbjct: 376 FFWFISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWY 435
Query: 380 PL-FTGLSLNSYILKIQFFTIF--IGVNITFFPQHFLGLAGIPRRYQI 514
L + LN+ K F +F IGV +TFFP +FLG G+ RR I
Sbjct: 436 NLIYNNCELNN---KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINI 480
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/77 (38%), Positives = 39/77 (50%)
Frame = +2
Query: 275 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 454
+D T HDTY+VV HFH + +P TG N + KI F F+G
Sbjct: 364 LDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAV 423
Query: 455 ITFFPQHFLGLAGIPRR 505
+ FF QH LG+ G+PRR
Sbjct: 424 LLFFTQHILGIYGMPRR 440
Score = 40.7 bits (91), Expect = 0.031
Identities = 19/82 (23%), Positives = 41/82 (50%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
++A + + ++GF AHH+F G+ + F T+ + + +F +AT+ +I
Sbjct: 275 LFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIR 334
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
++ ++ +G + LF G G
Sbjct: 335 FDSPMMWSIGGIALFFSAGAGG 356
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 27 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 206
+G +V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+
Sbjct: 20 LGAYSNVVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIV 79
Query: 207 -*RLGFVFLFTVGGLTG 254
+GF+FLFT+GG G
Sbjct: 80 WWIIGFIFLFTMGGRQG 96
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/97 (32%), Positives = 46/97 (47%)
Frame = +2
Query: 218 FCIFIHSRRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 397
F F+ + + LA S+D+ HDTY++VAHFH+++ +P G
Sbjct: 362 FLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGK 421
Query: 398 SLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 508
L + I +G N TF PQ LG G+PRRY
Sbjct: 422 RLPEGWGLVAAVMIILGFNFTFIPQFLLGNEGMPRRY 458
Score = 49.2 bits (112), Expect = 9e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A Y+ L I +GF HH+FT G F ++ + + T IK+F AT++
Sbjct: 290 AVAYSSLGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGS 349
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
I + GF+F GG+TG
Sbjct: 350 IYFATPFAYFAGFLFFLVFGGMTG 373
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V A++ + L F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+ +
Sbjct: 315 VAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPR 374
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ LGF+F+F +GG+TG
Sbjct: 375 LTVPMHFILGFLFIFVLGGMTG 396
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A ++ HD+Y+VVAH HYVL P FTG ++ + K F+
Sbjct: 397 VMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFW 456
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+F G N+ FF H G+ G+PRR
Sbjct: 457 LMFSGFNLAFFMMHLTGMRGMPRR 480
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 176
V A+LAI LG +V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 38 VLAMLAIVCLGSVVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/85 (34%), Positives = 42/85 (49%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+ L S+D+ HDTY+VVAHFH+++ +P G + + +
Sbjct: 381 IALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWGLVAAA 440
Query: 434 TIFIGVNITFFPQHFLGLAGIPRRY 508
I +G N TF PQ LG G+PRRY
Sbjct: 441 LIILGFNATFIPQFLLGNNGMPRRY 465
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +3
Query: 3 ARVYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 182
A Y+ L I +GF HH+F G F T+I+ V T IK+F + T++
Sbjct: 297 AVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGA 356
Query: 183 INYNPNIL*RLGFVFLFTVGGLTG 254
+ + GF+F GG+TG
Sbjct: 357 VEFKTPFAYFCGFLFFTVFGGMTG 380
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +3
Query: 36 LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 206
+G V HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 46 MGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y-PLFTGLSLNSYILKIQF 430
++L N+ ID+ LHDT YVV HFH+VLS L G+ L++ + +
Sbjct: 362 VVLGNAGIDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIA 421
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
I V +TF P HF G + +PRR
Sbjct: 422 PIFMISVLLTFLPMHFTGFSPLPRR 446
Score = 40.3 bits (90), Expect = 0.041
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTG 254
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TG
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTG 361
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 57.2 bits (132), Expect = 3e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 419 KIQFFTIFIGVNITFFPQHFLGLAGIPRRY 508
KI F +F+GVN+TFFPQHFLGLAG+PRRY
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRY 429
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V A +A+G+L F + HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 289 VAAAVALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPR 348
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ +L L F F +GGLTG
Sbjct: 349 LHLPMLWLLAFFATFVIGGLTG 370
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A D +HDTY++VAH HYVL P FTG + F+
Sbjct: 371 VMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLGPTAFW 430
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+ IG + TF H+ GL G+ RR
Sbjct: 431 LVVIGFHGTFLLLHWAGLLGMRRR 454
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY-ILKIQF 430
LI + +D T+H+T ++ HFH + + + +P TG +L +++ Q
Sbjct: 346 LINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQL 405
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
+ FIG+ +T FP H++G+ G+PRR
Sbjct: 406 WLWFIGMIVTTFPWHWVGILGMPRR 430
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/84 (29%), Positives = 48/84 (57%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+ +++ + L F+V HH+F GI++ + F + TI I++P + +F + T+ ++
Sbjct: 295 IISMVLVALQSFVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVR 354
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
+ L LG + LF +GG+TG F
Sbjct: 355 FTTPFLFSLGALILFIIGGITGVF 378
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/75 (36%), Positives = 35/75 (46%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI 424
I + L +D TY+VVAHFHYV+ YP TG N + KI
Sbjct: 374 ITGVFLGAIVLDYQFRGTYWVVAHFHYVMVAGATALFGGLYYW-YPKITGKMYNETLGKI 432
Query: 425 QFFTIFIGVNITFFP 469
QF F+G N+ +FP
Sbjct: 433 QFGVYFLGFNLLYFP 447
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +3
Query: 63 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 152
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 21 LAIGLLGFI-V*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 197
+AI L + V HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 275 IAIAFLSALGVWMHHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKT 334
Query: 198 NIL*RLGFVFLFTVGGLTG*F*P 266
+ + F+ +F +GG+TG F P
Sbjct: 335 PTILLISFIVMFLLGGITGVFFP 357
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/92 (28%), Positives = 42/92 (45%)
Frame = +2
Query: 275 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 454
ID L+ TY+VV HFHY++ +P ++G N + K + G
Sbjct: 361 IDYALNGTYFVVGHFHYMVYAILYALLGALFYY-FPFWSGKWYNDDLGKTGAILLVAGTF 419
Query: 455 ITFFPQHFLGLAGIPRRYQIIQTHIFHEI*FL 550
+T G+ G+PRRY +I + I+ F+
Sbjct: 420 LTATGMSIAGILGMPRRYAVIPSPIYDPFQFM 451
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/82 (29%), Positives = 47/82 (57%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
++AI + +G++V HH++ VG+D +R +++ TI+I++P IK+ ++ +
Sbjct: 434 IWAIYVMAYMGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALK 493
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ L + F+ LF V G TG
Sbjct: 494 VDLPFLFSMSFLLLFLVAGFTG 515
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +2
Query: 260 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTI 439
L++ S+++++HDT+YVVAHFH +LS + G+ + +
Sbjct: 518 LSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMHLIYY 577
Query: 440 FIGVNITFFPQHFLGLAGIPRR 505
G + F PQ +LG +G+PRR
Sbjct: 578 SGGQWVAFVPQFYLGFSGMPRR 599
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 53.6 bits (123), Expect = 4e-06
Identities = 30/83 (36%), Positives = 41/83 (49%)
Frame = +2
Query: 260 LANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTI 439
L + +ID TY+VVAHFHY+L +P TG + + + KI F
Sbjct: 365 LGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIHFALA 424
Query: 440 FIGVNITFFPQHFLGLAGIPRRY 508
+GV +TF PQ L +PRRY
Sbjct: 425 MLGVALTFLPQ--FALMDMPRRY 445
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/80 (30%), Positives = 46/80 (57%)
Frame = +3
Query: 15 AILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 194
A L ++ F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y
Sbjct: 283 AFLIATIISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYT 342
Query: 195 PNIL*RLGFVFLFTVGGLTG 254
+L +G + F +GG TG
Sbjct: 343 VPMLFAVGALLNFIIGGSTG 362
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/84 (33%), Positives = 41/84 (48%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
L L + S+D+ LHDT +VV HFH+ ++ +P G L + KI F+
Sbjct: 393 LFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIHFW 452
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
F+G+ + F Q G AG RR
Sbjct: 453 FTFLGLTLVFGGQLLAGYAGQERR 476
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
V+A++ + +L +V HH+F G+ F T++I++P+ + + + T+ +
Sbjct: 311 VWAMVLVTVLSAMVYGHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLR 370
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
Y+ +L LG VF+F VGGLTG F
Sbjct: 371 YDTPMLFALGTVFVFGVGGLTGLF 394
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 53.2 bits (122), Expect = 5e-06
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +2
Query: 272 SIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGV 451
+ID +H YYVVAHFHY + +P FTG + + +I + + GV
Sbjct: 390 AIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGV 449
Query: 452 NITFFPQHFLGLAGIPRRYQIIQT----HIFHEI 541
NI +FP F L +PRR Q+ IF+EI
Sbjct: 450 NILYFPMFF--LYDLPRRVYTYQSGFGYTIFNEI 481
Score = 33.5 bits (73), Expect = 4.8
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+ A+ AI + +V HH F GI + T I++PT + I +AT+ G +
Sbjct: 302 IAAMGAISVDSVMVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHK 361
Query: 189 YNPNIL*RLGFVFLFTVGGLTG 254
+ IL L F +GG++G
Sbjct: 362 FQTPILFALAASTSFMIGGVSG 383
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 52.8 bits (121), Expect = 7e-06
Identities = 30/93 (32%), Positives = 44/93 (47%)
Frame = +2
Query: 263 ANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 442
A+ D+ LH+TY+V+AHFH +P TG +N + K + F
Sbjct: 450 ADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFWGKFHAWWSF 509
Query: 443 IGVNITFFPQHFLGLAGIPRRYQIIQTHIFHEI 541
+ N TFFP GL G+ RR I ++ H+I
Sbjct: 510 VFFNCTFFPMFIAGLDGMNRRIAIYLPYL-HDI 541
Score = 40.7 bits (91), Expect = 0.031
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 188
+ ++ + + G + HH FT D + T T +++PTG + TI G ++
Sbjct: 366 IAGLVGVSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLR 424
Query: 189 YNPNIL*RLGFVFLFTVGGLTG*F 260
N +L L + F +GGLTG F
Sbjct: 425 INAAVLLVLMAMMNFLIGGLTGIF 448
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQI 185
V A +++ +L F + HH+FT GI A F++A+ ++AVPT +++F + T+ GT
Sbjct: 289 VAAAISLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPE 348
Query: 186 NYNPNIL*RLGFVFLFTVGGLTG 254
P ++ L F F +GGLTG
Sbjct: 349 MRLP-MMWILAFFATFVIGGLTG 370
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 433
+++A D +HDT+++VAH HYVL P TG + + F+
Sbjct: 371 VMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRVGDVAFW 430
Query: 434 TIFIGVNITFFPQHFLGLAGIPRR 505
+ +G + TF H++GL G RR
Sbjct: 431 LVTVGFHATFLAVHWVGLLGQRRR 454
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/50 (56%), Positives = 31/50 (62%)
Frame = +1
Query: 349 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNT 498
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDT 140
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 84 IDTRAYFTSATIIIAVPTGIKIFR*LAT 167
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK-IQF 430
++ A+ +++ +H+T +V HFH + + +P G L S L +Q
Sbjct: 348 IVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAYKLWPELCGRRLYSVDLALVQL 407
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRRYQIIQ 520
+ FIG+ I P H LGL G PRR +Q
Sbjct: 408 WGWFIGMVIMTTPWHILGLLGQPRRISAVQ 437
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +1
Query: 349 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFF 480
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF
Sbjct: 91 CNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFF 134
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -3
Query: 178 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQTINPN 35
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT P+
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQTTLPS 98
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3
Query: 9 VYAILAIGLLGFIV*AHHIFTVGIDIDTR 95
+YA+ +IG LGF V +HH+FTVG+D D R
Sbjct: 291 IYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK-IQF 430
LI A+ +I++ +H+T ++ HFH + P TG L S + +Q
Sbjct: 370 LINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRRLWSPTMALVQA 429
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRRYQI 514
+T F+G+ I H LGL +PRR I
Sbjct: 430 WTWFVGMGIFSHWMHMLGLLSMPRRTAI 457
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 40.3 bits (90), Expect = 0.041
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK- 421
I +I A+ ++ +H+T +VV HFH + P TG + K
Sbjct: 361 IGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRPFSRLAKKL 420
Query: 422 --IQFFTIFIGVNITFFPQHFLGLAGIPRR 505
IQ T +G+ + QH LGL G PRR
Sbjct: 421 ALIQVITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 40.3 bits (90), Expect = 0.041
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQF 430
++ A +I+ +H+T++VV HFH + P TG L + Q
Sbjct: 359 MVNAGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLWGKSVALAQV 418
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
F+G+ H GLAG+PRR
Sbjct: 419 VLWFVGMTFMSNAMHRSGLAGMPRR 443
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 38.3 bits (85), Expect = 0.17
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 RLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILK--I 424
R+ L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 28 RIALSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAV 84
Query: 425 QFFTIFIGVNITFFPQHFLGLAGIPRRY 508
+ +G PQ L G+PRRY
Sbjct: 85 AICMLCLGTAFMVAPQAVLPGGGMPRRY 112
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +1
Query: 145 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 246
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
Score = 33.9 bits (74), Expect = 3.6
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 414 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIRLSRLI 527
Y KFNFL Y E I F NIF LEYLDDI + +++
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQIL 443
>UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1;
Bolbophorus damnificus|Rep: Cytochrome oxidase subunit I
- Bolbophorus damnificus
Length = 125
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = -3
Query: 142 IPVGTAIIIVAEVKYARVSISIPTVNI**AQTINPNNPIASIA*T 8
IPVG I IV E+ + S PT+NI TI+PN I +IA T
Sbjct: 57 IPVGIPITIVVELNNTSLRNSNPTINIWWTHTIHPNTTIENIAPT 101
>UniRef50_Q9PQV6 Cluster: DNA-directed RNA polymerase subunit beta;
n=3; Ureaplasma|Rep: DNA-directed RNA polymerase subunit
beta - Ureaplasma parvum (Ureaplasma urealyticum biotype
1)
Length = 1434
Score = 33.9 bits (74), Expect = 3.6
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -2
Query: 578 DNREIYEPNEEIIFHEIYESG*SDIVEVFQLNLKNV 471
+N+++Y+ EEII I E DIVE+ +N+KN+
Sbjct: 336 NNKKLYDEREEIINCIISEKAAKDIVELLGINIKNI 371
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 33.1 bits (72), Expect = 6.3
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKI-QF 430
++ A +I+ +H+T +V HFH + +P T + S + + Q
Sbjct: 367 MVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFMAATYWIWPQITNKPIYSRSIGLFQV 426
Query: 431 FTIFIGVNITFFPQHFLGLAGIPRR 505
FIG+ + H G+ G PRR
Sbjct: 427 VLWFIGMALMSNAMHAQGILGAPRR 451
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.1 bits (72), Expect = 6.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 254 LILANSSIDITLHDTYYVVAHFHYVL 331
L+L +SI+ H++YYVV HFH ++
Sbjct: 352 LVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 32.7 bits (71), Expect = 8.3
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +2
Query: 203 FMKIRFCIFIHS-RRINRLILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 379
F I F I + + ++ A+ +++ +H+T +VV HFH +
Sbjct: 333 FTGITFAIILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTFIATSFLLV 392
Query: 380 PLFTGLSLNSYILKIQFFTI-FIGVNITFFPQHFLGLAGIPRR 505
PL G + L I T+ F+G I H GL PRR
Sbjct: 393 PLLFGRDYVAKKLLIAVPTLWFVGQLIFGIGYHVAGLLHAPRR 435
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 32.7 bits (71), Expect = 8.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 245 INRLILANSSIDITLHDTYYVVAHFHYVL 331
+ L L + I+ +H+TYYVV HFHY++
Sbjct: 119 VQALPLPINIINGVVHNTYYVVGHFHYMV 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,527,783
Number of Sequences: 1657284
Number of extensions: 6143114
Number of successful extensions: 12586
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 12144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12499
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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