Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0049
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 101 8e-22
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 101 8e-22
AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical ... 51 9e-07
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 36 0.035
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 29 3.1
Z66522-4|CAC70090.1| 349|Caenorhabditis elegans Hypothetical pr... 29 5.4
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical ... 28 7.1
AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical ... 28 7.1
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 101 bits (241), Expect = 8e-22
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +1
Query: 511 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 690
GR ++ + P+ RLDAGTFGTMGVG GF++AAA+W RD++P +V+ V+GDSAFGFS ME
Sbjct: 463 GRTMMPSRLPKRRLDAGTFGTMGVGHGFSLAAALWARDHSPKTKVLVVQGDSAFGFSAME 522
Query: 691 IETMFRYKLPXXXXXXXXXXXYMG 762
+ET+ RY LP Y G
Sbjct: 523 LETIARYNLPVVTVIINNSGIYRG 546
Score = 98.7 bits (235), Expect = 4e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +3
Query: 15 TKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAPDV 194
+KLP+L TP GKGV +D + AR+ AL +AD + L+GAR NW+LHFG PPR+ DV
Sbjct: 299 SKLPWLATPGGKGVASDLHPRFIGQARSLALREADTVFLIGARFNWILHFGLPPRFQKDV 358
Query: 195 KIIQVEISPEEFHNSKKSE 251
K++Q++I PEEFH + K+E
Sbjct: 359 KVVQIDICPEEFHQNVKTE 377
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 233 QQQEIRITVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLKQKQKANTEFVEAQASST 412
Q + + + DI L RL + + ++ W++ L++ + N VE
Sbjct: 372 QNVKTEVPLLGDIGETLAELTPRLGDWTYD---ESTEWFKKLRENAEKNRAAVEKFVDDH 428
Query: 413 AVPLNYYTVFKTVQQGIP-KDSIIVSEGANTMDL 511
+ PLNYY ++ +++ + D I+++EGANTMD+
Sbjct: 429 STPLNYYAAYQPIREFLANNDVIVINEGANTMDI 462
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 101 bits (241), Expect = 8e-22
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +1
Query: 511 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 690
GR ++ + P+ RLDAGTFGTMGVG GF++AAA+W RD++P +V+ V+GDSAFGFS ME
Sbjct: 463 GRTMMPSRLPKRRLDAGTFGTMGVGHGFSLAAALWARDHSPKTKVLVVQGDSAFGFSAME 522
Query: 691 IETMFRYKLPXXXXXXXXXXXYMG 762
+ET+ RY LP Y G
Sbjct: 523 LETIARYNLPVVTVIINNSGIYRG 546
Score = 98.7 bits (235), Expect = 4e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +3
Query: 15 TKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAPDV 194
+KLP+L TP GKGV +D + AR+ AL +AD + L+GAR NW+LHFG PPR+ DV
Sbjct: 299 SKLPWLATPGGKGVASDLHPRFIGQARSLALREADTVFLIGARFNWILHFGLPPRFQKDV 358
Query: 195 KIIQVEISPEEFHNSKKSE 251
K++Q++I PEEFH + K+E
Sbjct: 359 KVVQIDICPEEFHQNVKTE 377
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 233 QQQEIRITVHSDIRPFTEALVKRLSERKFSLQPQNNSWWQGLKQKQKANTEFVEAQASST 412
Q + + + DI L RL + + ++ W++ L++ + N VE
Sbjct: 372 QNVKTEVPLLGDIGETLAELTPRLGDWTYD---ESTEWFKKLRENAEKNRAAVEKFVDDH 428
Query: 413 AVPLNYYTVFKTVQQGIP-KDSIIVSEGANTMDL 511
+ PLNYY ++ +++ + D I+++EGANTMD+
Sbjct: 429 STPLNYYAAYQPIREFLANNDVIVINEGANTMDI 462
>AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical
protein T26C12.1 protein.
Length = 640
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 538 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRYKL 717
P LD G FGT+GVG GFA+ A + P + V + GD + G+S ME +T R+KL
Sbjct: 491 PLQWLDPGAFGTLGVGGGFALGA----KTVYPKRPVYIIWGDGSCGYSLMEYDTFARHKL 546
Query: 718 P 720
P
Sbjct: 547 P 547
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.035
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -2
Query: 181 YLGGCPKCSIQF--ILAPRSSMT--SAFSRACVRAVDTQYSDSSATTPLPIGVGKKGN 20
YLG CS+ ++ P +MT SAF RA + AV +S S T LP+ V K N
Sbjct: 285 YLGNLTSCSLAVYPVIEPIIAMTCISAFRRATINAVTCSHSVSPTTAVLPVLVSKYRN 342
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -2
Query: 445 FENSVVVQWYCSAACLSLY----KFGVCFLFLFQSLPPTVVLRLQ*ELPFGQPFYKSFCK 278
F N V+ QW CS+ S + G+ Q+L +V ++ + G P+Y+ +C
Sbjct: 46 FANLVLDQWICSSIESSSFPVFGNHGIEETVAKQNLQGPIVCQINGFIDVGSPYYQQYCS 105
Query: 277 RS 272
S
Sbjct: 106 MS 107
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = -2
Query: 445 FENSVVVQWYCSAACLSLY----KFGVCFLFLFQSLPPTVVLRLQ*ELPFGQPFYKSFCK 278
F N V+ QW CS+ S + G+ Q+L +V ++ + G P+Y+ +C
Sbjct: 46 FANLVLDQWICSSIESSSFPVFGNHGIEETVAKQNLQGPIVCQINGFIDVGSPYYQQYCS 105
Query: 277 RS 272
S
Sbjct: 106 MS 107
>Z66522-4|CAC70090.1| 349|Caenorhabditis elegans Hypothetical
protein F14E5.6 protein.
Length = 349
Score = 28.7 bits (61), Expect = 5.4
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +1
Query: 325 ATSKQQLVAGTETETKS-KHRICRGSSKQHCSTTELLH--CFQNSSTRHSKRFNHCQRRS 495
+T+K ++ T+T KS K + S+ + T + F ++ RH R +
Sbjct: 58 STTKDPFISSTKTHEKSTKVHVHTSSTPYPVTQTNPIRRLIFAHTIFRHGSRAPSKNANN 117
Query: 496 EYHGFGRGLLLNNHPRHRLDAGTF-GTMGVGPGF 594
Y+ GRG L + H G F VG GF
Sbjct: 118 TYYPRGRGQLTDRGYNHSFMLGRFLKKRYVGTGF 151
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 448 CFENSVVVQWYCSAAC-LSLYKFGVCFLFL 362
C +N++V + YC A+C +Y+F + F+ L
Sbjct: 493 CSKNTIVKKGYCDASCQKQIYQFIIMFIAL 522
>AF016439-4|AAV28339.1| 489|Caenorhabditis elegans Hypothetical
protein R02F11.3b protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 340 QLVAGTETETKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRS 495
+L AG+ T S+ + + +K + ELL F+N S ++FN +RR+
Sbjct: 62 KLTAGSTTSLSSQSKNAKKVNKFYKKQNELLENFKNDS-EQIEQFNRTRRRT 112
>AF016439-3|AAB65899.2| 467|Caenorhabditis elegans Hypothetical
protein R02F11.3a protein.
Length = 467
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1
Query: 340 QLVAGTETETKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRS 495
+L AG+ T S+ + + +K + ELL F+N S ++FN +RR+
Sbjct: 62 KLTAGSTTSLSSQSKNAKKVNKFYKKQNELLENFKNDS-EQIEQFNRTRRRT 112
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 352 GTETETKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQ 486
G +ETK+K+++ + SK +++ + ST ++CQ
Sbjct: 92 GKSSETKTKNKVKKNKSKASADESQMGSAEERLSTNRPSTLDYCQ 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,862,172
Number of Sequences: 27780
Number of extensions: 423746
Number of successful extensions: 1206
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -