Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0049
         (827 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   2.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   8.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   8.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   8.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   8.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   8.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   8.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.0  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 766 INPCKFHYCXXXXXLQVTCTGTLSLFPCLR 677
           I+PC   YC      +++   T+++  C+R
Sbjct: 79  IDPCASKYCGIGKECELSPNSTIAVCVCMR 108


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -1

Query: 212 FDLNN-FNVGRISRRLSKVQ 156
           +DL N FN+ R  R+LSK Q
Sbjct: 14  YDLENEFNINRPRRKLSKKQ 33


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 378 FAFCFCFSPCHQLLF*GCNENFLSDNLFTRAS 283
           F FC C  P H L+  G  E F  + LF   S
Sbjct: 576 FDFCGCGWPQHMLIPKGNKEGFAME-LFVMVS 606


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 LKNFTTARNQNYSTLRH*TFYRSSCKKV 303
           L N T   N NY    +   Y ++CKK+
Sbjct: 85  LSNRTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 LKNFTTARNQNYSTLRH*TFYRSSCKKV 303
           L N T   N NY    +   Y ++CKK+
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 LKNFTTARNQNYSTLRH*TFYRSSCKKV 303
           L N T   N NY    +   Y ++CKK+
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 220 LKNFTTARNQNYSTLRH*TFYRSSCKKV 303
           L N T   N NY    +   Y ++CKK+
Sbjct: 85  LSNKTIHNNNNYKYNYNNNNYNNNCKKL 112


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 555 CWYIWHYGGRTWLRYCSSNVV 617
           CW +  YG R +  + + +V+
Sbjct: 828 CWEVMSYGERPYWNWSNQDVI 848


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -1

Query: 419 VLQCCLLEPLQIRCLLFVSVSVPATNCCFEVAMRTSFRTTFLQELL 282
           +L   L+ P  +  L+  S S+P   C F +AM  +  T+ +  L+
Sbjct: 233 LLVAVLVMPFAVYVLVNGSWSLPGFVCDFYIAMDVTCSTSSIFNLV 278



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 432 TLFSKQFNKAFQKIQS 479
           T+F+ +F KAF K+ S
Sbjct: 678 TVFNPEFRKAFHKLVS 693


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 313 EVLIATSKQQLVAGTETETKSKHRICRGSSKQHCST 420
           ++ +ATSK  + A ++TE  +  ++ R  S +  +T
Sbjct: 555 KISLATSKSFIKANSQTEVSNSKKLDRLDSLRGSTT 590


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,819
Number of Sequences: 438
Number of extensions: 5420
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)