Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0048
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens ... 159 7e-39
BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase... 115 2e-25
AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA ... 115 2e-25
BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetola... 65 3e-10
U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase hom... 64 5e-10
BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetola... 64 5e-10
AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase p... 64 5e-10
AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase p... 64 5e-10
BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein p... 31 5.6
AK125894-1|BAC86334.1| 1224|Homo sapiens rp86). protein. 31 5.6
AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein pr... 31 5.6
Z93930-1|CAB45016.1| 261|Homo sapiens X-box binding protein 1 p... 30 7.3
X55543-1|CAA39149.1| 261|Homo sapiens TREB protein protein. 30 7.3
M31627-1|AAA36031.1| 260|Homo sapiens protein ( Human X box bin... 30 7.3
CR456611-1|CAG30497.1| 261|Homo sapiens XBP1 protein. 30 7.3
BC015709-1|AAH15709.1| 241|Homo sapiens Unknown (protein for IM... 30 7.3
BC012841-1|AAH12841.1| 261|Homo sapiens X-box binding protein 1... 30 7.3
BC000938-1|AAH00938.1| 261|Homo sapiens X-box binding protein 1... 30 7.3
AB076383-1|BAB82981.1| 261|Homo sapiens X box-binding protein u... 30 7.3
>AK125241-1|BAC86096.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ43251 fis, clone HEART2006131, weakly similar
to Mus musculus 2-hydroxyphytanoyl-CoA lyase
(Hpcl-pending). ).
Length = 569
Score = 159 bits (387), Expect = 7e-39
Identities = 92/242 (38%), Positives = 129/242 (53%), Gaps = 3/242 (1%)
Frame = +3
Query: 9 ENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAP 188
E T+ PFLPTPMGKGV++D CVS AR++AL ADV+LL+GAR+NW+LH+G PR++
Sbjct: 233 EKTQAPFLPTPMGKGVISDSHPLCVSAARSKALKDADVVLLIGARLNWILHYGHSPRWSN 292
Query: 189 DVKIIQVEISPEEFHNSKKSEXXXXXXXXXXXXXXXXGCPKGSSHCN---LKTTVGGRD* 359
V+ IQ++I+PEE N+++ S+ N + V
Sbjct: 293 KVRFIQIDIAPEELGNNRQDTLPLLGDIQLVVSQITQALTGKLSNINPDYVSGLVNKVKQ 352
Query: 360 NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLNNHP 539
N K+K +GS + + + S + + GR + P
Sbjct: 353 NVEKTKTAGSKGSDSAILNYSTAFTVIK--SLLPENDIVYVSEGANTMDIGRSYFDVHEP 410
Query: 540 RHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRYKLP 719
RHRLDAGT TMGVG G+AI A + Y KRV+ + GDSAFGFS ME+ET R +LP
Sbjct: 411 RHRLDAGTGATMGVGMGYAIGAQSY---YGDAKRVVSIVGDSAFGFSAMELETAIRSRLP 467
Query: 720 VI 725
++
Sbjct: 468 LL 469
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 346 VAGTETEQKANTEFVEAQAS--STAVPLNYYTVFKTVQQGIPKDSII-VSEGANTMDMAE 516
V+G + K N E + S S + LNY T F ++ +P++ I+ VSEGANTMD+
Sbjct: 343 VSGLVNKVKQNVEKTKTAGSKGSDSAILNYSTAFTVIKSLLPENDIVYVSEGANTMDIGR 402
Query: 517 VY 522
Y
Sbjct: 403 SY 404
>BC001627-1|AAH01627.1| 578|Homo sapiens 2-hydroxyacyl-CoA lyase 1
protein.
Length = 578
Score = 115 bits (277), Expect = 2e-25
Identities = 53/79 (67%), Positives = 60/79 (75%)
Frame = +3
Query: 9 ENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAP 188
E KLPFLPTPMGKGVV D YCV AR++AL ADVI+L GAR+NW+LHFG PPRY P
Sbjct: 238 EQYKLPFLPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLNWILHFGLPPRYQP 297
Query: 189 DVKIIQVEISPEEFHNSKK 245
DVK IQV+I EE N+ K
Sbjct: 298 DVKFIQVDICAEELGNNVK 316
Score = 113 bits (271), Expect = 8e-25
Identities = 52/72 (72%), Positives = 61/72 (84%)
Frame = +3
Query: 510 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 689
GR +L N PRHRLDAGTFGTMGVG GFAIAAA+ +D +PG+ +ICVEGDSAFGFSGME
Sbjct: 405 GRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSGME 464
Query: 690 IETMFRYKLPVI 725
+ET+ RY LP+I
Sbjct: 465 VETICRYNLPII 476
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1
Query: 364 EQKANTEFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDM 510
+ K+N + AS ++P+NYYTVF VQ+ +P+D +VSEGANTMD+
Sbjct: 356 KMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDI 404
>AJ131753-1|CAB60200.1| 578|Homo sapiens 2-hydroxyphytanoyl-CoA
lyase protein.
Length = 578
Score = 115 bits (277), Expect = 2e-25
Identities = 53/79 (67%), Positives = 60/79 (75%)
Frame = +3
Query: 9 ENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAP 188
E KLPFLPTPMGKGVV D YCV AR++AL ADVI+L GAR+NW+LHFG PPRY P
Sbjct: 238 EQYKLPFLPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLNWILHFGLPPRYQP 297
Query: 189 DVKIIQVEISPEEFHNSKK 245
DVK IQV+I EE N+ K
Sbjct: 298 DVKFIQVDICAEELGNNVK 316
Score = 112 bits (269), Expect = 1e-24
Identities = 52/72 (72%), Positives = 60/72 (83%)
Frame = +3
Query: 510 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 689
GR +L N PRHRLDAGTFGTMGVG GFAIAAA+ +D +PG +ICVEGDSAFGFSGME
Sbjct: 405 GRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGHWIICVEGDSAFGFSGME 464
Query: 690 IETMFRYKLPVI 725
+ET+ RY LP+I
Sbjct: 465 VETICRYNLPII 476
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +1
Query: 364 EQKANTEFVEAQASSTAVPLNYYTVFKTVQQGIPKDSIIVSEGANTMDM 510
+ K+N + AS ++P+NYYTVF VQ+ +P+D +VSEGANTMD+
Sbjct: 356 KMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDI 404
>BC011761-1|AAH11761.1| 632|Homo sapiens ilvB (bacterial acetolactate
synthase)-like protein.
Length = 632
Score = 64.9 bits (151), Expect = 3e-10
Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 4/245 (1%)
Frame = +3
Query: 3 ARENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRY 182
A E +P M +G++ + R+ AL KADVI+L G ++ L +G+ +
Sbjct: 307 AVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSH 366
Query: 183 APDVKIIQVEISPEEFH-NSK---KSEXXXXXXXXXXXXXXXXGCPKGSSHCNLKTTVGG 350
+ KII V+ + EE NS K + G + + +
Sbjct: 367 SS--KIIIVDRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELRE 424
Query: 351 RD*NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLN 530
D + ++ QH + ++L + + +S ++ G L+
Sbjct: 425 ADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVD---GGDFVGTAAHLVQP 481
Query: 531 NHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRY 710
P LD G FGT+GVG GFA+ A + CR P V C+ GD AFG+S +E +T R+
Sbjct: 482 RGPLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRH 537
Query: 711 KLPVI 725
K+PV+
Sbjct: 538 KIPVM 542
>U61263-1|AAC50934.1| 632|Homo sapiens acetolactate synthase homolog
protein.
Length = 632
Score = 64.1 bits (149), Expect = 5e-10
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Frame = +3
Query: 3 ARENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRY 182
A E +P M +G++ + R+ AL KADVI+L G ++ L +G+ +
Sbjct: 307 AVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSH 366
Query: 183 APDVKIIQVEISPEEFH-NSK---KSEXXXXXXXXXXXXXXXXGCPKGSSHCNLKTTVGG 350
+ KII V + EE NS K + G + + +
Sbjct: 367 SS--KIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELRE 424
Query: 351 RD*NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLN 530
D + ++ QH + ++L + + +S ++ G L+
Sbjct: 425 ADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVD---GGDFVGTAAHLVQP 481
Query: 531 NHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRY 710
P LD G FGT+GVG GFA+ A + CR P V C+ GD AFG+S +E +T R+
Sbjct: 482 RGPLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRH 537
Query: 711 KLPVI 725
K+PV+
Sbjct: 538 KIPVM 542
>BC011722-1|AAH11722.1| 632|Homo sapiens ilvB (bacterial acetolactate
synthase)-like protein.
Length = 632
Score = 64.1 bits (149), Expect = 5e-10
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Frame = +3
Query: 3 ARENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRY 182
A E +P M +G++ + R+ AL KADVI+L G ++ L +G+ +
Sbjct: 307 AVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSH 366
Query: 183 APDVKIIQVEISPEEFH-NSK---KSEXXXXXXXXXXXXXXXXGCPKGSSHCNLKTTVGG 350
+ KII V + EE NS K + G + + +
Sbjct: 367 SS--KIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELRE 424
Query: 351 RD*NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLN 530
D + ++ QH + ++L + + +S ++ G L+
Sbjct: 425 ADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVD---GGDFVGTAAHLVQP 481
Query: 531 NHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRY 710
P LD G FGT+GVG GFA+ A + CR P V C+ GD AFG+S +E +T R+
Sbjct: 482 RGPLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRH 537
Query: 711 KLPVI 725
K+PV+
Sbjct: 538 KIPVM 542
>AC004794-3|AAC18916.1| 393|Homo sapiens Acetolactate synthase
protein.
Length = 393
Score = 64.1 bits (149), Expect = 5e-10
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Frame = +3
Query: 3 ARENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRY 182
A E +P M +G++ + R+ AL KADVI+L G ++ L +G+ +
Sbjct: 68 AVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSH 127
Query: 183 APDVKIIQVEISPEEFH-NSK---KSEXXXXXXXXXXXXXXXXGCPKGSSHCNLKTTVGG 350
+ KII V + EE NS K + G + + +
Sbjct: 128 SS--KIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELRE 185
Query: 351 RD*NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLN 530
D + ++ QH + ++L + + +S ++ G L+
Sbjct: 186 ADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVD---GGDFVGTAAHLVQP 242
Query: 531 NHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRY 710
P LD G FGT+GVG GFA+ A + CR P V C+ GD AFG+S +E +T R+
Sbjct: 243 RGPLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRH 298
Query: 711 KLPVI 725
K+PV+
Sbjct: 299 KIPVM 303
>AC003956-1|AAB94632.1| 632|Homo sapiens acetolactate synthase
protein.
Length = 632
Score = 64.1 bits (149), Expect = 5e-10
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Frame = +3
Query: 3 ARENTKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRY 182
A E +P M +G++ + R+ AL KADVI+L G ++ L +G+ +
Sbjct: 307 AVETLGVPCFLGGMARGLLGRNHPLHIRENRSAALKKADVIVLAGTVCDFRLSYGRVLSH 366
Query: 183 APDVKIIQVEISPEEFH-NSK---KSEXXXXXXXXXXXXXXXXGCPKGSSHCNLKTTVGG 350
+ KII V + EE NS K + G + + +
Sbjct: 367 SS--KIIIVNRNREEMLLNSDIFWKPQEAVQGDVGSFVLKLVEGLQGQTWAPDWVEELRE 424
Query: 351 RD*NRTKSKHRICRGSSKQHCSTTELLHCFQNSSTRHSKRFNHCQRRSEYHGYGRGLLLN 530
D + ++ QH + ++L + + +S ++ G L+
Sbjct: 425 ADRQKEQTFREKAAMPVAQHLNPVQVLQLVEETLPDNSILVVD---GGDFVGTAAHLVQP 481
Query: 531 NHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRY 710
P LD G FGT+GVG GFA+ A + CR P V C+ GD AFG+S +E +T R+
Sbjct: 482 RGPLRWLDPGAFGTLGVGAGFALGAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRH 537
Query: 711 KLPVI 725
K+PV+
Sbjct: 538 KIPVM 542
>BC110508-1|AAI10509.1| 1248|Homo sapiens DKFZP586P0123 protein
protein.
Length = 1248
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 492 SEYHGYGRGLLLNNH-PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR 641
SE+H LLL P RL F G+ PG + +WCR Y P R
Sbjct: 360 SEHH---HSLLLPAEVPVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVR 407
>AK125894-1|BAC86334.1| 1224|Homo sapiens rp86). protein.
Length = 1224
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 492 SEYHGYGRGLLLNNH-PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR 641
SE+H LLL P RL F G+ PG + +WCR Y P R
Sbjct: 336 SEHH---HSLLLPAEVPVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVR 383
>AB231764-1|BAE17137.1| 1963|Homo sapiens hypothetical protein
protein.
Length = 1963
Score = 30.7 bits (66), Expect = 5.6
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 492 SEYHGYGRGLLLNNH-PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKR 641
SE+H LLL P RL F G+ PG + +WCR Y P R
Sbjct: 1075 SEHH---HSLLLPAEVPVQRLLLSAFSAQGLVPGGGVQFEIWCRYYYPNVR 1122
>Z93930-1|CAB45016.1| 261|Homo sapiens X-box binding protein 1
protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
>X55543-1|CAA39149.1| 261|Homo sapiens TREB protein protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
>M31627-1|AAA36031.1| 260|Homo sapiens protein ( Human X box
binding protein-1 (XBP-1) mRNA, complete cds. ).
Length = 260
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 173 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 226
>CR456611-1|CAG30497.1| 261|Homo sapiens XBP1 protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
>BC015709-1|AAH15709.1| 241|Homo sapiens Unknown (protein for
IMAGE:3911945) protein.
Length = 241
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 154 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 207
>BC012841-1|AAH12841.1| 261|Homo sapiens X-box binding protein 1
protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
>BC000938-1|AAH00938.1| 261|Homo sapiens X-box binding protein 1
protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
>AB076383-1|BAB82981.1| 261|Homo sapiens X box-binding protein
unspliced form protein.
Length = 261
Score = 30.3 bits (65), Expect = 7.3
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 464 QKIQS-LSAKERI-PWIWPRFIAQQSSETQARCWYIWHYGGRTWLRYCSSNVVPR-LCTW 634
Q++Q+ LS + I PWI Q S CW W TW + CSSN +P+ L W
Sbjct: 174 QQVQAQLSPLQNISPWILAVLTLQIQSLIS--CWAFW----TTWTQSCSSNALPQSLPAW 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,978,272
Number of Sequences: 237096
Number of extensions: 2472873
Number of successful extensions: 5630
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5623
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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