Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0048
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 103 1e-22
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 103 1e-22
AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical ... 54 8e-08
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 36 0.029
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 103 bits (247), Expect = 1e-22
Identities = 44/72 (61%), Positives = 59/72 (81%)
Frame = +3
Query: 510 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 689
GR ++ + P+ RLDAGTFGTMGVG GF++AAA+W RD++P +V+ V+GDSAFGFS ME
Sbjct: 463 GRTMMPSRLPKRRLDAGTFGTMGVGHGFSLAAALWARDHSPKTKVLVVQGDSAFGFSAME 522
Query: 690 IETMFRYKLPVI 725
+ET+ RY LPV+
Sbjct: 523 LETIARYNLPVV 534
Score = 98.7 bits (235), Expect = 4e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +3
Query: 15 TKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAPDV 194
+KLP+L TP GKGV +D + AR+ AL +AD + L+GAR NW+LHFG PPR+ DV
Sbjct: 299 SKLPWLATPGGKGVASDLHPRFIGQARSLALREADTVFLIGARFNWILHFGLPPRFQKDV 358
Query: 195 KIIQVEISPEEFHNSKKSE 251
K++Q++I PEEFH + K+E
Sbjct: 359 KVVQIDICPEEFHQNVKTE 377
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 376 NTEFVEAQASSTAVPLNYYTVFKTVQQGIP-KDSIIVSEGANTMDM 510
N VE + PLNYY ++ +++ + D I+++EGANTMD+
Sbjct: 417 NRAAVEKFVDDHSTPLNYYAAYQPIREFLANNDVIVINEGANTMDI 462
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 103 bits (247), Expect = 1e-22
Identities = 44/72 (61%), Positives = 59/72 (81%)
Frame = +3
Query: 510 GRGLLLNNHPRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGME 689
GR ++ + P+ RLDAGTFGTMGVG GF++AAA+W RD++P +V+ V+GDSAFGFS ME
Sbjct: 463 GRTMMPSRLPKRRLDAGTFGTMGVGHGFSLAAALWARDHSPKTKVLVVQGDSAFGFSAME 522
Query: 690 IETMFRYKLPVI 725
+ET+ RY LPV+
Sbjct: 523 LETIARYNLPVV 534
Score = 98.7 bits (235), Expect = 4e-21
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +3
Query: 15 TKLPFLPTPMGKGVVADESEYCVSTARTQALLKADVILLLGARMNWMLHFGQPPRYAPDV 194
+KLP+L TP GKGV +D + AR+ AL +AD + L+GAR NW+LHFG PPR+ DV
Sbjct: 299 SKLPWLATPGGKGVASDLHPRFIGQARSLALREADTVFLIGARFNWILHFGLPPRFQKDV 358
Query: 195 KIIQVEISPEEFHNSKKSE 251
K++Q++I PEEFH + K+E
Sbjct: 359 KVVQIDICPEEFHQNVKTE 377
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 376 NTEFVEAQASSTAVPLNYYTVFKTVQQGIP-KDSIIVSEGANTMDM 510
N VE + PLNYY ++ +++ + D I+++EGANTMD+
Sbjct: 417 NRAAVEKFVDDHSTPLNYYAAYQPIREFLANNDVIVINEGANTMDI 462
>AF067623-1|AAC17553.2| 640|Caenorhabditis elegans Hypothetical
protein T26C12.1 protein.
Length = 640
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3
Query: 537 PRHRLDAGTFGTMGVGPGFAIAAAMWCRDYAPGKRVICVEGDSAFGFSGMEIETMFRYKL 716
P LD G FGT+GVG GFA+ A + P + V + GD + G+S ME +T R+KL
Sbjct: 491 PLQWLDPGAFGTLGVGGGFALGA----KTVYPKRPVYIIWGDGSCGYSLMEYDTFARHKL 546
Query: 717 PVI 725
PVI
Sbjct: 547 PVI 549
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -1
Query: 181 YLGGCPKCSIQF--ILAPRSSMT--SAFSRACVRAVDTQYSDSSATTPLPIGVGKKGN 20
YLG CS+ ++ P +MT SAF RA + AV +S S T LP+ V K N
Sbjct: 285 YLGNLTSCSLAVYPVIEPIIAMTCISAFRRATINAVTCSHSVSPTTAVLPVLVSKYRN 342
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 349 AGTETEQKANTEFVEAQASSTAVPLNYY--TVFKTVQQGIPKDSIIVSEGANTMDMAEVY 522
AG K F A+ + AV ++ TVF +V+ +V++GA T + +EV
Sbjct: 336 AGAGAGSKFGGSFEGAENGNAAVGTSHTEETVFASVKTAKLPSGHVVAKGAKTAEFSEVV 395
Query: 523 CS 528
C+
Sbjct: 396 CN 397
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 349 AGTETEQKANTEFVEAQASSTAVPLNYY--TVFKTVQQGIPKDSIIVSEGANTMDMAEVY 522
AG K F A+ + AV ++ TVF +V+ +V++GA T + +EV
Sbjct: 346 AGAGAGSKFGGSFEGAENGNAAVGTSHTEETVFASVKTAKLPSGHVVAKGAKTAEFSEVV 405
Query: 523 CS 528
C+
Sbjct: 406 CN 407
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = -2
Query: 450 NCFENSVVVQWYCSAACLSLYKFGVCFLFCFSPCHQLLF*GCNENFLSDNLFT---RASV 280
NC +NS Q CS+AC ++ C C C+ GCN N + + T R+
Sbjct: 175 NC-QNSCQNQ--CSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 279 KGLMSEC-TVILISCCCEILQEIFR 208
G S C + +S C Q+ R
Sbjct: 232 SGCRSTCSSTSTLSVCIPACQQTCR 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,315,374
Number of Sequences: 27780
Number of extensions: 370693
Number of successful extensions: 1111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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