Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0046
         (817 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83307-7|CAM13057.1|  531|Homo sapiens elongation protein 4 homo...    31   6.6  
Z83307-6|CAM13056.1|  424|Homo sapiens elongation protein 4 homo...    31   6.6  
Z83001-1|CAM28371.1|  531|Homo sapiens elongation protein 4 homo...    31   6.6  
BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.         31   6.6  
AK000505-1|BAA91212.1|  424|Homo sapiens protein ( Homo sapiens ...    31   6.6  

>Z83307-7|CAM13057.1|  531|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 380 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*ASLENIW 264
           NIL++  APL  DK K+ F+    +H  P +   ++  W
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIAW 162


>Z83307-6|CAM13056.1|  424|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 380 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*ASLENIW 264
           NIL++  APL  DK K+ F+    +H  P +   ++  W
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIAW 162


>Z83001-1|CAM28371.1|  531|Homo sapiens elongation protein 4 homolog
           (S. cerevisiae) protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 380 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*ASLENIW 264
           NIL++  APL  DK K+ F+    +H  P +   ++  W
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIAW 162


>BC012514-1|AAH12514.1|  535|Homo sapiens ELP4 protein protein.
          Length = 535

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 380 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*ASLENIW 264
           NIL++  APL  DK K+ F+    +H  P +   ++  W
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIAW 162


>AK000505-1|BAA91212.1|  424|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20498 fis, clone KAT08960. ).
          Length = 424

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 380 NILRKCSAPLTADKYKRHFNSTALSHSRPMA*ASLENIW 264
           NIL++  APL  DK K+ F+    +H  P +   ++  W
Sbjct: 124 NILQELPAPLLDDKCKKEFDEDVYNHKTPESNIKMKIAW 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,002,351
Number of Sequences: 237096
Number of extensions: 2620642
Number of successful extensions: 8009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8007
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)