Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0044
         (495 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EYA1 Cluster: Viral A-type inclusion protein, putativ...    36   0.50 
UniRef50_Q2VJ36 Cluster: Glycosyltransferase; n=1; Escherichia c...    33   2.7  
UniRef50_UPI0000DAE4E5 Cluster: hypothetical protein Rgryl_01000...    33   3.5  
UniRef50_UPI0000E472BB Cluster: PREDICTED: hypothetical protein;...    33   4.6  
UniRef50_UPI00006CA685 Cluster: hypothetical protein TTHERM_0064...    32   6.1  
UniRef50_A2DSA8 Cluster: Putative uncharacterized protein; n=1; ...    32   6.1  
UniRef50_Q2W888 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  
UniRef50_A0KN03 Cluster: 5'-nucleotidase/2',3'-cyclic phosphodie...    32   8.1  
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w...    32   8.1  

>UniRef50_A2EYA1 Cluster: Viral A-type inclusion protein, putative;
            n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
            protein, putative - Trichomonas vaginalis G3
          Length = 1662

 Score = 35.9 bits (79), Expect = 0.50
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
 Frame = +2

Query: 2    KKNVNSIPTAQIHHNGENLKGKRDRNRSPLRQKLVFYHQRLLNTKTEN----TVLKKTRI 169
            KK +N I    +    E LK K +     ++QK+V ++++  N+K EN    +VLKK   
Sbjct: 1124 KKKLNEISV--LKKENEELKQKLNEINEEMKQKIVDFNEKFSNSKKENEEKLSVLKKEND 1181

Query: 170  DLVQRLHAY 196
            +L Q+L+ +
Sbjct: 1182 NLKQKLNEF 1190


>UniRef50_Q2VJ36 Cluster: Glycosyltransferase; n=1; Escherichia
           coli|Rep: Glycosyltransferase - Escherichia coli
          Length = 318

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -3

Query: 394 NEIGTNCNKILPADGAIPSHCTLAPILLSPKHYFTHSP--RTLALDLGPLHFFRHF 233
           ++IG    K++ + G I  HCT+ P L   KHYF H+    T++  L P  F ++F
Sbjct: 115 DDIGICGIKLIDSFGNIQRHCTVQPKL---KHYFNHATGLSTISSRLFPYIFLKNF 167


>UniRef50_UPI0000DAE4E5 Cluster: hypothetical protein
           Rgryl_01000488; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01000488 - Rickettsiella
           grylli
          Length = 73

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = +2

Query: 53  NLKGKRDRNRSPLRQKLVFYHQRLLNTKTENTVLKKTRI 169
           NLK +R +N+S L+ KL  + QRL + KT+ T++ KT +
Sbjct: 16  NLKKQRGKNKSHLK-KLTIHLQRLPDLKTQWTIVNKTSL 53


>UniRef50_UPI0000E472BB Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 546

 Score = 32.7 bits (71), Expect = 4.6
 Identities = 24/74 (32%), Positives = 34/74 (45%)
 Frame = +3

Query: 204 KRTKKIRYLQKWRKK*RGPRSSASVLGECVK*CLGDNNIGANVQWDGMAPSAGSILLQLV 383
           KR +K   L  WRK  RGP     +LG     C+G + +   ++   +     SIL    
Sbjct: 84  KREEKENPLTGWRKALRGP---ILLLGRLQVFCMGFHQV--KIKGQQVTRDEASILALAP 138

Query: 384 PISLWDQFDFFSTG 425
            +S +D F FF TG
Sbjct: 139 HVSFFDVFIFFVTG 152


>UniRef50_UPI00006CA685 Cluster: hypothetical protein
           TTHERM_00647260; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00647260 - Tetrahymena
           thermophila SB210
          Length = 1957

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +2

Query: 11  VNSIPTAQIHHNGENLKGKRDRNRSPLRQKLVFYHQRLLNTKTENTVLKKTRIDLVQRL 187
           +NS  TAQ +   E+   K + +  P+ QK   Y +RLL   T+   +KK   D  + +
Sbjct: 784 LNSSNTAQFNQLAEDSSIKANVSLDPVNQKKEIYQKRLLTINTQIEEIKKKNEDSTKNI 842


>UniRef50_A2DSA8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 802

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +2

Query: 35  IHHNGENLKGKRDRNRSPLRQKLVFYHQRLLNTKTENTVLKKTRIDLVQRLHAYIAKT 208
           ++   E+L+ + D     ++QK+    + L N+K EN  L +T  DL  +L   +AKT
Sbjct: 538 LYTKNEDLQAENDE----MKQKIEELEKELKNSKEENEKLNQTNADLQSKLDKELAKT 591


>UniRef50_Q2W888 Cluster: Putative uncharacterized protein; n=1;
           Magnetospirillum magneticum AMB-1|Rep: Putative
           uncharacterized protein - Magnetospirillum magneticum
           (strain AMB-1 / ATCC 700264)
          Length = 170

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -3

Query: 109 EYKFLPERAPIPVPLAFQILPVVVYL 32
           EY+ L ER P P+P AF ILP+V++L
Sbjct: 36  EYERLAER-PFPLPFAFLILPLVLHL 60


>UniRef50_A0KN03 Cluster: 5'-nucleotidase/2',3'-cyclic
           phosphodiesterase; n=6; Gammaproteobacteria|Rep:
           5'-nucleotidase/2',3'-cyclic phosphodiesterase -
           Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
           / NCIB 9240)
          Length = 663

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 361 PADGAIPSHCT-LAPILLSPKHYFTHSPRTLALDLGPLHF 245
           P D    SH + +AP++   ++Y+ ++P   AL  GP+HF
Sbjct: 413 PGDNGSDSHGSDVAPLVAEGQYYWANTPAVQALTGGPVHF 452


>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1238

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 50  ENLKGKRDRNRSPLRQKLVFYHQRLLNTKTENTVLKKT--RIDLVQRLHAYIAKTYQKDK 223
           E+  G   +N  P R++L+     ++  KT N   K T  R++   R    I KT++  K
Sbjct: 29  ESKIGMDSQNLQPFRKELLHVQDSIMLPKTTNDNYKMTDERLEAFYREKEIIIKTFENQK 88

Query: 224 IP 229
           +P
Sbjct: 89  VP 90


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,193,294
Number of Sequences: 1657284
Number of extensions: 10260689
Number of successful extensions: 26602
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26599
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)