Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0044
         (495 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   7.6  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   7.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   10.0 

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 88  AQAKTCILPSETTKYQN*KHSTEEDAYRF 174
           A+ +TC+LP E  K Q      E D Y F
Sbjct: 457 AEKETCLLPLEDDKEQR----LEADRYNF 481


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 184 PLHQIDTRLLQYCVFSFGI**SLMVEYKFLPER 86
           P H + TRLL+Y +F  GI  ++  E + +P R
Sbjct: 46  PNHHLATRLLRYFIFG-GIIQAISAETR-IPRR 76


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +2

Query: 74  RNRSPLRQKLVF----YHQRLLNTKTENTVLKKTRIDLVQRLHAYIAK 205
           R+ S  RQ  +F     H+ +L T     +  K ++ LVQ+  +YI +
Sbjct: 41  RDESAGRQDKLFDTIRLHKEVLQTVKLQPISMKRKLRLVQQAKSYITR 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,719
Number of Sequences: 2352
Number of extensions: 10916
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)