Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0042
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83246-1|CAB05842.2| 312|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC084154-3|AAK29869.1| 323|Caenorhabditis elegans Hypothetical ... 43 1e-04
Z81072-2|CAB03023.2| 332|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U97550-2|AAK18979.1| 280|Caenorhabditis elegans Hypothetical pr... 36 0.017
U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertilit... 30 1.4
U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertilit... 30 1.4
U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertilit... 30 1.4
AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol tris... 30 1.4
AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol tris... 30 1.4
AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol tris... 30 1.4
Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.8
>Z83246-1|CAB05842.2| 312|Caenorhabditis elegans Hypothetical
protein ZK795.1 protein.
Length = 312
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +1
Query: 307 DLVELRKCTPKYFYCKK*TYNGYEQEYIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEK 486
D+ L K T ++ + +G ++E++ +ED+T P I+D+K+G+ T+DP+A EK
Sbjct: 93 DIEMLCKLTADFYGIQTIFVDGQDREFLAMEDVTIGYQRPAILDLKMGQVTYDPIAKPEK 152
Query: 487 IKNEQAK 507
I+ E+ K
Sbjct: 153 IEKERIK 159
>AC084154-3|AAK29869.1| 323|Caenorhabditis elegans Hypothetical
protein Y22D7AR.6 protein.
Length = 323
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +1
Query: 379 QEYIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKNEQAKLRCASSSTVLHTRLPGL 558
+ +I+L DLT RM P I+D+K+G R AT KI AK + +S+T L RL G+
Sbjct: 115 KNFIVLSDLTYRMKSPRILDLKLGTRQHGDQATVSKIACMTAKCQATTSAT-LGIRLCGM 173
Query: 559 Q 561
+
Sbjct: 174 K 174
>Z81072-2|CAB03023.2| 332|Caenorhabditis elegans Hypothetical
protein F30A10.3 protein.
Length = 332
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +1
Query: 385 YIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKNEQAKLRCASSSTVLHTRLPGLQA 564
+++LE++ PC++D+KIG R A+E K + K R ++S+T L R+ G+Q
Sbjct: 132 FLLLENVVAHYTRPCVLDLKIGTRQHGDDASESKRHRQLMKCRHSTSAT-LGVRVVGMQL 190
Query: 565 E*RET 579
ET
Sbjct: 191 YEAET 195
>U97550-2|AAK18979.1| 280|Caenorhabditis elegans Hypothetical
protein T20F7.3 protein.
Length = 280
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 385 YIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIKNEQAKLRCASSSTVLHTRLPG 555
Y++++D + P I+D+K+G RT +EEK K K ++++ VL RL G
Sbjct: 106 YLLMKDEAHAAVSPRILDLKLGTRTHSDYISEEK-KINHIKKSLSTTTAVLGLRLSG 161
>U88314-4|AAK71360.1| 494|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform a protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 242 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 284
>U88314-3|AAK71361.1| 394|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform b protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 142 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 184
>U88314-2|AAF99884.2| 461|Caenorhabditis elegans Let-23 fertility
effector/regulatorprotein 2, isoform c protein.
Length = 461
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 209 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 251
>AF045613-1|AAC38962.1| 461|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 3 protein.
Length = 461
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 209 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 251
>AF045612-1|AAC38961.1| 394|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 2 protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 142 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 184
>AF045611-1|AAC38960.1| 494|Caenorhabditis elegans inositol
trisphosphate 3-kinaseform 1 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +1
Query: 331 TPKYFYCKK*TYNGYEQEYIILEDLTRRMLEP---CIMDVKIGKRTW 462
TPKY+ E+ +I +EDL ++ +P IMD+KIG RT+
Sbjct: 242 TPKYYD----ELEKNEEHFIEIEDLLQQFHDPTKTAIMDIKIGTRTF 284
>Z72503-1|CAA96596.2| 617|Caenorhabditis elegans Hypothetical
protein C26C6.3 protein.
Length = 617
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 59 SIYQVHYNIEKRNDELMTKPLALQKGL-EIQAYDLQVAGHRKTEDTKYSGLLQCSNGTIL 235
S ++ H+N+E++ E + + L K L +++ + GH ED+K + GTI
Sbjct: 31 SEFKEHFNVEEKQLETVEELLIKMKKLAHSRSFKGREFGHDAVEDSKKEVAISTQQGTIN 90
Query: 236 KPI 244
K +
Sbjct: 91 KKV 93
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 295 SSDPDLVELRKCTPKYFYCK 354
S +PD E +KCT F CK
Sbjct: 212 SDEPDTCEFKKCTANEFQCK 231
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 295 SSDPDLVELRKCTPKYFYCK 354
S +PD E +KCT F CK
Sbjct: 212 SDEPDTCEFKKCTANEFQCK 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,825,495
Number of Sequences: 27780
Number of extensions: 323029
Number of successful extensions: 786
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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