Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0042
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g07370.4 68418.m00844 inositol polyphosphate 6-/3-/5-kinase 2... 41 7e-04
At5g07370.3 68418.m00843 inositol polyphosphate 6-/3-/5-kinase 2... 41 7e-04
At5g07370.2 68418.m00842 inositol polyphosphate 6-/3-/5-kinase 2... 41 7e-04
At5g07370.1 68418.m00841 inositol polyphosphate 6-/3-/5-kinase 2... 41 7e-04
At5g61760.1 68418.m07749 inositol polyphosphate 6-/3-/5-kinase 2... 40 0.001
At1g27980.1 68414.m03427 pyridoxal-dependent decarboxylase famil... 30 1.3
At2g16030.1 68415.m01838 expressed protein 29 3.1
At1g52490.1 68414.m05925 F-box family protein contains F-box dom... 28 4.1
At3g46790.1 68416.m05079 pentatricopeptide (PPR) repeat-containi... 28 5.4
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 27 7.2
At2g13690.1 68415.m01510 PRLI-interacting factor, putative simil... 27 7.2
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 27 7.2
At2g26900.1 68415.m03227 bile acid:sodium symporter family prote... 27 9.5
At1g80410.1 68414.m09413 acetyltransferase-related low similarit... 27 9.5
>At5g07370.4 68418.m00844 inositol polyphosphate 6-/3-/5-kinase 2a
(IPK2a) contains Pfam domain, PF03770: Inositol
polyphosphate kinase
Length = 286
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 EVDFYERMWASSDPDLVE-LRKCTPKYFYCKK*TYNGYEQEYIILEDLTRRMLEPCIMDV 441
EV FYE SS+ ++ E + + P Y + ++LE+L +P +MDV
Sbjct: 43 EVKFYESF--SSNTEVPEHIHRYFPVYHGTQA-VEGSDGAAMMVLENLLAEYTKPSVMDV 99
Query: 442 KIGKRTWDPLATEEKIK 492
K+G RTW P A+EE I+
Sbjct: 100 KMGSRTWYPDASEEYIQ 116
>At5g07370.3 68418.m00843 inositol polyphosphate 6-/3-/5-kinase 2a
(IPK2a) contains Pfam domain, PF03770: Inositol
polyphosphate kinase
Length = 286
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 EVDFYERMWASSDPDLVE-LRKCTPKYFYCKK*TYNGYEQEYIILEDLTRRMLEPCIMDV 441
EV FYE SS+ ++ E + + P Y + ++LE+L +P +MDV
Sbjct: 43 EVKFYESF--SSNTEVPEHIHRYFPVYHGTQA-VEGSDGAAMMVLENLLAEYTKPSVMDV 99
Query: 442 KIGKRTWDPLATEEKIK 492
K+G RTW P A+EE I+
Sbjct: 100 KMGSRTWYPDASEEYIQ 116
>At5g07370.2 68418.m00842 inositol polyphosphate 6-/3-/5-kinase 2a
(IPK2a) contains Pfam domain, PF03770: Inositol
polyphosphate kinase
Length = 286
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 EVDFYERMWASSDPDLVE-LRKCTPKYFYCKK*TYNGYEQEYIILEDLTRRMLEPCIMDV 441
EV FYE SS+ ++ E + + P Y + ++LE+L +P +MDV
Sbjct: 43 EVKFYESF--SSNTEVPEHIHRYFPVYHGTQA-VEGSDGAAMMVLENLLAEYTKPSVMDV 99
Query: 442 KIGKRTWDPLATEEKIK 492
K+G RTW P A+EE I+
Sbjct: 100 KMGSRTWYPDASEEYIQ 116
>At5g07370.1 68418.m00841 inositol polyphosphate 6-/3-/5-kinase 2a
(IPK2a) contains Pfam domain, PF03770: Inositol
polyphosphate kinase
Length = 286
Score = 40.7 bits (91), Expect = 7e-04
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 EVDFYERMWASSDPDLVE-LRKCTPKYFYCKK*TYNGYEQEYIILEDLTRRMLEPCIMDV 441
EV FYE SS+ ++ E + + P Y + ++LE+L +P +MDV
Sbjct: 43 EVKFYESF--SSNTEVPEHIHRYFPVYHGTQA-VEGSDGAAMMVLENLLAEYTKPSVMDV 99
Query: 442 KIGKRTWDPLATEEKIK 492
K+G RTW P A+EE I+
Sbjct: 100 KMGSRTWYPDASEEYIQ 116
>At5g61760.1 68418.m07749 inositol polyphosphate 6-/3-/5-kinase 2b
(IPK2b) contains Pfam domain, PF03770: inositol
polyphosphate kinase
Length = 300
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 385 YIILEDLTRRMLEPCIMDVKIGKRTWDPLATEEKIK 492
+++L+D+ P +MDVKIG RTW P +EE K
Sbjct: 83 HLVLDDVVSGYANPSVMDVKIGSRTWYPDVSEEYFK 118
>At1g27980.1 68414.m03427 pyridoxal-dependent decarboxylase family
protein similar to sphingosine-1-phosphate lyase [Homo
sapiens] GI:10129683; contains Pfam profile PF00282:
Pyridoxal-dependent decarboxylase conserved domain
Length = 544
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 399 FQNNILLFVAIVSLFLAVEILGRAFSKFHQVRIGRC 292
F+ +LL V +VSLFLA +I+G F H+ + C
Sbjct: 27 FEPLVLLLVPLVSLFLA-QIIGSVFGVVHEKGLKAC 61
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 329 HFRSSTRSGSDDAHMRS*KSTSRLWNL*LWVSGLFRYCT 213
HF ST S H+ K +R+W+ W S L+ + T
Sbjct: 47 HFPRSTCDSSPRQHLPLPKKNARIWSSGAWKSRLYSFST 85
>At1g52490.1 68414.m05925 F-box family protein contains F-box domain
Pfam:PF00646
Length = 423
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 439 VKIGKRTWDPLATEEKIKNEQAKLRCASSS 528
V+ + W P TE + N Q KL C SS+
Sbjct: 291 VRTPETLWSPKCTERGLFNHQGKLGCISSN 320
>At3g46790.1 68416.m05079 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 657
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 381 LFVAIVSLFLAVEILGRAFSKFHQVRIGRC 292
LF +S F+ EIL R ++FH+ + G C
Sbjct: 622 LFTKFISKFMEKEILVRDVNRFHRFKNGVC 651
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 444 FNIHDARLEHPPRQIFQNNILLFVAIVSLFLAVEILG 334
F+ H R PP++ Q++ + L LAVE+LG
Sbjct: 353 FSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLG 389
>At2g13690.1 68415.m01510 PRLI-interacting factor, putative similar
to PRLI-interacting factor G [Arabidopsis thaliana]
GI:11139264 (PMID:9765207); supporting cDNA
gi|26450291|dbj|AK117606.1|
Length = 544
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 346 RNTWACIFEVPPGQDRTMPTCAHRNLPRAS 257
R +W C F VPP T + ++P S
Sbjct: 22 RRSWCCSFAVPPASPDTRSISSRNHIPAKS 51
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 387 ILLFVAIVSLFLAVEILGRAFSKFHQVRIGRCPHALI 277
+L F + L L + R+F KF + +G PH LI
Sbjct: 5 LLCFFLFLFLLLQATMSKRSFKKFVEQELGSLPHFLI 41
>At2g26900.1 68415.m03227 bile acid:sodium symporter family protein
low similarity to SP|Q12908 Ileal sodium/bile acid
cotransporter {Homo sapiens}; contains Pfam profile
PF01758: Sodium Bile acid symporter family
Length = 409
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = -1
Query: 554 PGSLVCRTVLLLAQRNLACSFLIFSSVASGSHVLLPILTSMMQG 423
PG +++ N+A S L+ + G+ ++ P+LT ++ G
Sbjct: 200 PGGQASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAG 243
>At1g80410.1 68414.m09413 acetyltransferase-related low similarity
to acetyltransferase Tubedown-1 [Mus musculus]
GI:8497318, N-TERMINAL ACETYLTRANSFERASE GB:P12945 from
(Saccharomyces cerevisiae); contains Pfam profile
PF00515 TPR Domain
Length = 897
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 305 LTWWNFENARPSISTARNKLTMATNRSIL 391
L W E RPSIS +NK M N+ L
Sbjct: 728 LRWRVLEAERPSISQLQNKSLMEANKEFL 756
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,060,703
Number of Sequences: 28952
Number of extensions: 306407
Number of successful extensions: 761
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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