Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0041
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical pr... 141 4e-34
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 128 4e-30
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 128 4e-30
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 128 4e-30
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 128 4e-30
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 68 9e-12
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 40 0.002
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 6.5
U88311-4|AAB42344.1| 537|Caenorhabditis elegans Udp-glucuronosy... 28 6.5
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 28 6.5
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 28 6.5
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 28 6.5
Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z83122-7|CAF31483.1| 618|Caenorhabditis elegans Hypothetical
protein R11A5.4d protein.
Length = 618
Score = 141 bits (342), Expect = 4e-34
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ ATAAAE +GK VMHDP AMRPF GYNFG YL+HW + R MPKI+HVNWFRKD
Sbjct: 458 SEATAAAEFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSN 517
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RV+DWI+RR DG
Sbjct: 518 NKFLWPGFGDNIRVIDWIIRRLDG 541
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ETP+G +P G++N E L V+ +EL S+P D+W Q++ I K+ E+VGEDLP + E
Sbjct: 548 ETPIGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAE 607
Query: 451 L 453
+
Sbjct: 608 M 608
>Z83122-6|CAF31482.1| 587|Caenorhabditis elegans Hypothetical
protein R11A5.4c protein.
Length = 587
Score = 141 bits (342), Expect = 4e-34
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ ATAAAE +GK VMHDP AMRPF GYNFG YL+HW + R MPKI+HVNWFRKD
Sbjct: 427 SEATAAAEFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSN 486
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RV+DWI+RR DG
Sbjct: 487 NKFLWPGFGDNIRVIDWIIRRLDG 510
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ETP+G +P G++N E L V+ +EL S+P D+W Q++ I K+ E+VGEDLP + E
Sbjct: 517 ETPIGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAE 576
Query: 451 L 453
+
Sbjct: 577 M 577
>Z83122-5|CAB05600.1| 654|Caenorhabditis elegans Hypothetical
protein R11A5.4a protein.
Length = 654
Score = 141 bits (342), Expect = 4e-34
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ ATAAAE +GK VMHDP AMRPF GYNFG YL+HW + R MPKI+HVNWFRKD
Sbjct: 494 SEATAAAEFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSN 553
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RV+DWI+RR DG
Sbjct: 554 NKFLWPGFGDNIRVIDWIIRRLDG 577
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ETP+G +P G++N E L V+ +EL S+P D+W Q++ I K+ E+VGEDLP + E
Sbjct: 584 ETPIGTVPAKGSINLEGLGEVNWDELMSVPADYWKQDAQEIRKFLDEQVGEDLPEPVRAE 643
Query: 451 L 453
+
Sbjct: 644 M 644
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 128 bits (309), Expect = 4e-30
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ TAAAE +GK VMHDP AMRPF GYN+G YL+HW + + PKIFHVNWFR+ +
Sbjct: 490 SETTAAAEFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKD 549
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RVLDWILRR G
Sbjct: 550 HKFLWPGFGDNIRVLDWILRRVAG 573
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 128 bits (309), Expect = 4e-30
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ TAAAE +GK VMHDP AMRPF GYN+G YL+HW + + PKIFHVNWFR+ +
Sbjct: 205 SETTAAAEFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKD 264
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RVLDWILRR G
Sbjct: 265 HKFLWPGFGDNIRVLDWILRRVAG 288
Score = 68.1 bits (159), Expect = 7e-12
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ET +GY+P+ G +N + L +D N+L SIPKD+W+++ D + +VG DLP + DE
Sbjct: 296 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDE 355
Query: 451 L 453
L
Sbjct: 356 L 356
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 128 bits (309), Expect = 4e-30
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ TAAAE +GK VMHDP AMRPF GYN+G YL+HW + + PKIFHVNWFR+ +
Sbjct: 380 SETTAAAEFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKD 439
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RVLDWILRR G
Sbjct: 440 HKFLWPGFGDNIRVLDWILRRVAG 463
Score = 68.1 bits (159), Expect = 7e-12
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ET +GY+P+ G +N + L +D N+L SIPKD+W+++ D + +VG DLP + DE
Sbjct: 471 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDE 530
Query: 451 L 453
L
Sbjct: 531 L 531
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 128 bits (309), Expect = 4e-30
Identities = 54/84 (64%), Positives = 63/84 (75%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNMPKIFHVNWFRKDEQ 184
+ TAAAE +GK VMHDP AMRPF GYN+G YL+HW + + PKIFHVNWFR+ +
Sbjct: 490 SETTAAAEFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLGKAPHKAPKIFHVNWFRETKD 549
Query: 185 GKFLWPGFGENSRVLDWILRRCDG 256
KFLWPGFG+N RVLDWILRR G
Sbjct: 550 HKFLWPGFGDNIRVLDWILRRVAG 573
Score = 68.1 bits (159), Expect = 7e-12
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +1
Query: 271 ETPLGYIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIEKYFKEEVGEDLPNEMWDE 450
ET +GY+P+ G +N + L +D N+L SIPKD+W+++ D + +VG DLP + DE
Sbjct: 581 ETAIGYVPKRGTINLDGLPRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDE 640
Query: 451 L 453
L
Sbjct: 641 L 641
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 67.7 bits (158), Expect = 9e-12
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 5 TRATAAAEHSGKMVMHDPFAMRPFXGYNFGDYLKHWPSMPQPGRNM-PKIFHVNWFRKDE 181
+ ATAAAE +GK VMHDP AMRPF GYNFG YL+HW + R + F W K
Sbjct: 494 SEATAAAEFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKIFQNQFVPRWMLKRR 553
Query: 182 QGK 190
+ +
Sbjct: 554 ESR 556
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +2
Query: 38 KMVMHDPFAMRPFXGYNFGDYLKHWPSM----PQPGRNM-----PKIFHVNWFRKDEQGK 190
++++ P ++ Y+KHW M N P+IF N +++ + GK
Sbjct: 472 RILVECPMLRADAINFSIAKYVKHWLEMGVGVKSSSENFENPPPPQIFFTNLYQEVD-GK 530
Query: 191 FLWPGFGENSRVLDWILRRCDGSPA 265
LWPG +N+R+ ++I RC +PA
Sbjct: 531 PLWPGGVDNARIFEYIYERC-ANPA 554
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 2407 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 2446
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 2407 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 2446
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 710 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 749
>Z81530-2|CAB04306.1| 359|Caenorhabditis elegans Hypothetical
protein F36D1.2 protein.
Length = 359
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 455 KVEEEHTSLSFKLDQRYKLNESISILK 535
K+E EH + ++ L RY+L E++ LK
Sbjct: 206 KLENEHRTTNYTLSIRYQLKENLKTLK 232
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = -3
Query: 272 SAWQGSRRSDARSSLRPESSRRNRARGTYPVHLYGTS*RGRS 147
S + SRRS RS+ R SRR+ +RG+ +YG + R RS
Sbjct: 85 STSRSSRRSVVRSASRGSVSRRSSSRGS----VYGRTGRSRS 122
>U88311-4|AAB42344.1| 537|Caenorhabditis elegans
Udp-glucuronosyltransferase protein28 protein.
Length = 537
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +1
Query: 286 YIPRAGALNTENLSAVDMNELFSIPKDFWLQESDAIE---KYFKEEVGEDLPNEMWDELK 456
Y+P ++ + ++ + E + + K+ + D + K ++E +GEDLPN W EL
Sbjct: 190 YVPSGFSVTGDVMTMAERYENWMVVKEINIALHDMFDGEMKSYREFLGEDLPN--WRELL 247
Query: 457 S 459
S
Sbjct: 248 S 248
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 2407 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 2446
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 2407 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 2446
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 340 SCRQRLGFPYSEHRLSVCTPVESRRGRAPVAATQDPV*DPR 218
SCR L P + RL++ TPV+ G AP++ P PR
Sbjct: 710 SCRAELYTPDDDERLNIVTPVQI-GGLAPLSGQDYPQTIPR 749
>Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical
protein M05D6.2 protein.
Length = 451
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 608 LLFDTDNAPHTWVTGISVNKREGLMFVSKIGRLCSLNLK 724
+L + PH + G+SV + E F SK RLC N K
Sbjct: 374 MLRSPTSVPHRLLPGLSVIQSELCAFTSKFLRLCVHNRK 412
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,941,530
Number of Sequences: 27780
Number of extensions: 388458
Number of successful extensions: 1086
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -