Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0040
(740 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 125 4e-29
07_01_0578 + 4295386-4296489,4297394-4297507 124 6e-29
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.14
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.18
08_02_1278 - 25838146-25839411 32 0.55
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 31 1.3
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 30 2.2
02_04_0457 + 23093020-23093343,23093798-23093806 29 5.1
01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 29 5.1
10_07_0029 + 12031711-12032464,12044289-12044386 28 6.8
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 28 6.8
02_04_0073 - 19471254-19472681 28 6.8
07_01_0469 - 3552409-3553368 28 9.0
07_01_0024 + 159839-159923,160395-160442,160884-160895,161347-16... 28 9.0
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 9.0
04_01_0244 - 3194141-3195091,3195301-3195312 28 9.0
03_06_0721 - 35742380-35742736,35743206-35743398,35743497-357435... 28 9.0
03_03_0125 - 14630078-14630136,14630197-14631160 28 9.0
03_03_0122 - 14617879-14618871 28 9.0
03_01_0092 - 731069-731434,731569-733080 28 9.0
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 28 9.0
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 125 bits (301), Expect = 4e-29
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 57 VSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWH 115
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/87 (49%), Positives = 59/87 (67%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+GS F ++PGV+ APGGHLGRFVIWT+ AF +LD ++G + TP+
Sbjct: 217 EGSKVVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTECAFKKLDEVYGGFDTPAL 276
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
+KK F LP+PKMAN DL+RL+ SDE++
Sbjct: 277 KKKGFVLPRPKMANADLSRLINSDEVQ 303
Score = 93.5 bits (222), Expect = 2e-19
Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
PS ARGH IE +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGK
Sbjct: 137 PSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGK 196
Query: 422 GKMRNRRRIQRKGPLIIFNKD-QGLTRAFRTSP 517
GKMRNRR I RKGPLI++ + + +AFR P
Sbjct: 197 GKMRNRRYINRKGPLIVYGTEGSKVVKAFRNLP 229
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 124 bits (300), Expect = 6e-29
Identities = 52/59 (88%), Positives = 56/59 (94%)
Frame = +3
Query: 3 VSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 179
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 58 VSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWH 116
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/87 (48%), Positives = 60/87 (68%)
Frame = +1
Query: 478 QGSGSDSRFPHIPGVEXXXXXXXXXXXXAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSK 657
+GS F ++PGV+ APGGHLGRFVIWT+SAF +L+ ++G+++ PS
Sbjct: 218 EGSKIVKAFRNLPGVDVANVERLNLLDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSL 277
Query: 658 QKKNFNLPQPKMANTDLTRLLKSDEIR 738
+KK F LP+PKMAN DL R++ SDE++
Sbjct: 278 KKKGFILPRPKMANADLGRIINSDEVQ 304
Score = 93.5 bits (222), Expect = 2e-19
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Frame = +2
Query: 242 PSAR*ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGK 421
PS ARGH IE +PELPLV++D + I KT QA+ L+++ A++D K S +R GK
Sbjct: 138 PSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGK 197
Query: 422 GKMRNRRRIQRKGPLIIFNKD-QGLTRAFRTSP 517
GKMRNRR I RKGPLI++ + + +AFR P
Sbjct: 198 GKMRNRRYINRKGPLIVYGTEGSKIVKAFRNLP 230
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 33 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 143
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 139 PPRHMLPKAP*PDLWVPPP 83
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 361 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 254
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = -2
Query: 511 CAESASQTLILVEDYEGSLTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 344
C + + ED +GS+ + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 224 CVHNEDELHAFFEDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 562 APG--GHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKMANT 702
APG G GR+V+ SA LDP F SW S++ K F++ + A++
Sbjct: 670 APGVDGCSGRYVV-AASAGNALDPGFCSWDYYSREAKAFHIEEISHASS 717
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 18 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 122
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>01_07_0167 -
41613834-41613842,41614060-41615056,41615456-41616336,
41616437-41616508,41616590-41616649,41616736-41616885,
41616974-41617021,41617107-41617181,41617266-41617411,
41617514-41617594,41617703-41617810,41618046-41618057,
41618137-41618148,41618499-41618546,41619021-41619105
Length = 927
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 427 NAQPSSYPA*GTP--HNLQQGSGSDSRFPHI 513
N P G+P +NLQ+G GS S+ PH+
Sbjct: 85 NMAPGRLAYAGSPNIYNLQEGEGSSSKMPHL 115
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 144 YVHHDTCYRRHPDRTYG 94
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 548 TS*SWLREVILDVSSSGLSPHSAGLTPYSGHGRHHQNKRR----TSTCPNRRWPTLTSHV 715
+S S+LR + LD+SSS +P S+ H HHQ + S+ P WP
Sbjct: 376 SSSSFLRCLGLDMSSSSSAPPSSSGQQQQHHHHHHQETMQVPLPASSLP--EWPPRLQPE 433
Query: 716 FSSLMRSG 739
S ++ SG
Sbjct: 434 PSPMLSSG 441
>02_04_0073 - 19471254-19472681
Length = 475
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 602 SPHSAGLTPYSGHGRHHQNKRRTSTCPNRRWPTLTSHVFSSLMR 733
+P G +P S HG HH++++ T N + L V ++R
Sbjct: 20 APRPRGASPLSSHGHHHRSRKIHRTFNNVKITVLCGLVTILVLR 63
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 144 YVHHDTCYRRHPDRTYG 94
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRFHPRRASG 110
>07_01_0024 +
159839-159923,160395-160442,160884-160895,161347-161427,
161530-161675,161918-161965,162054-162203,165647-165706,
165788-165859,165960-166409,166640-166839,167239-168236,
168676-168683,169057-169230,169341-169659,169748-169824,
169897-169966,170040-170111,170204-170418,170540-170665,
170751-171046,171133-171157,171163-171303,171400-171498,
171571-171702,171793-171912
Length = 1407
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
Frame = +1
Query: 457 GTP--HNLQQGSGSDSRFPHI 513
G+P +NLQ+G GS S+ PH+
Sbjct: 55 GSPNIYNLQEGEGSSSKMPHL 75
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 120 RRHPDRTYGYHHHGHAEFGQQHVRYPMI 37
R H D +G+HHH H G H P +
Sbjct: 68 RAHGDHHHGHHHHHHGH-GHSHHHGPEV 94
>04_01_0244 - 3194141-3195091,3195301-3195312
Length = 320
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 144 YVHHDTCYRRHPDRTYG 94
Y+ HDT YR HP R G
Sbjct: 98 YIFHDTAYRFHPRRANG 114
>03_06_0721 -
35742380-35742736,35743206-35743398,35743497-35743552,
35745951-35746727
Length = 460
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 594 DDETSKMTSRSQLQEVQLVNIQELHTGDVRK 502
D E+S + ++ QL E +L+N++++ GD+ K
Sbjct: 286 DVESSGVPAKLQLLEQELINLEKIGNGDLSK 316
>03_03_0125 - 14630078-14630136,14630197-14631160
Length = 340
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 580 GRFVIWTQSAFGRL-DPLFGSWK 645
G FV+W AFG L L G+WK
Sbjct: 127 GGFVVWADRAFGPLAGSLLGTWK 149
>03_03_0122 - 14617879-14618871
Length = 330
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 580 GRFVIWTQSAFGRL-DPLFGSWK 645
G FV+W AFG L L G+WK
Sbjct: 124 GGFVVWADRAFGPLAGSLLGTWK 146
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 136 PRHMLPKAP*PDLWVPPPRTRGIRATARPVP 44
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 612 ECGLSPDDETSKMTSRSQLQEVQ 544
+CG+ PD+ S++ S+ QEV+
Sbjct: 51 DCGMDPDEAVSRLLSQDTFQEVK 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,500,301
Number of Sequences: 37544
Number of extensions: 474913
Number of successful extensions: 1848
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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