Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0040
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.0  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   7.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 574 HLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLP 681
           H   +  WT ++     P  G +KT SK    F+LP
Sbjct: 25  HRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFSLP 60


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 93  YHHHGHAEFGQQHVRY 46
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 105 GQGAFGNMCRGGRMFAP 155
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/16 (37%), Positives = 7/16 (43%)
 Frame = +2

Query: 44  GYRTCCCPNSACPWWW 91
           G+    C N    WWW
Sbjct: 353 GFLQPVCQNEMNKWWW 368


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,524
Number of Sequences: 438
Number of extensions: 3770
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)