Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0039
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.62
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 2.5
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 3.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 3.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 4.4
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 5.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.6
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 21 7.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.6
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.62
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 383 FTCICLCTIGSAKWKARLHVHSCRCHSHM 469
+ CI +GSA+ ARL+V+ HM
Sbjct: 469 YKCIAASKVGSAEHSARLNVYGLPFIRHM 497
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 404 TIGSAKWKARLHVHSCRCH 460
++G+ K R H C+CH
Sbjct: 28 SLGALKMHIRTHTLPCKCH 46
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +3
Query: 15 Y*CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRAT 164
Y C C I R R CR+ + R + ERQR+ +Q + +T
Sbjct: 144 YACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVEST 198
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.3
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +3
Query: 15 Y*CEGPSCCFISNCGRIRTSKCRFSQSY-----RHLIGHERQRSGGSNQLLLRAT 164
Y C C I R R CR+ + R + ERQR+ +Q + +T
Sbjct: 144 YACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVEST 198
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 157 RRSSWLLPPLLCRSCPIRCR 98
RRS + PP +CP+ C+
Sbjct: 333 RRSEPVEPPRRKNNCPLHCK 352
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 199 NYAMDVYELNRRVNSSE 249
NY DVY+ N V+S E
Sbjct: 7 NYYGDVYQWNHTVSSGE 23
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 30 NQILTTNAWLKLEWV 44
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 380 GFTCICLCTIGSAKWKARLHVHSCRC 457
GF C+C+ + + K RLH C
Sbjct: 9 GF-CVCVGALTIEELKTRLHTEQSVC 33
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWV 384
+ +L T WL++EWV
Sbjct: 98 NQILTTNAWLKLEWV 112
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 340 SMLLWTLRWLEVEWVYVHM 396
+ LL T WL++EW V+M
Sbjct: 67 NQLLITNLWLKLEWNDVNM 85
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,845
Number of Sequences: 438
Number of extensions: 4353
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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