Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0037
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...   132   2e-31
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...   132   2e-31
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341...    91   9e-19
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929...    49   5e-06
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151...    44   1e-04
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438...    44   2e-04
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744...    43   3e-04
07_03_1414 - 26403361-26403969                                         34   0.14 
07_03_1422 + 26462871-26463434,26463772-26463897                       33   0.33 
07_03_1413 - 26396426-26396890                                         33   0.33 
12_01_0924 + 9161155-9161646,9161748-9162164,9162250-9162313,916...    28   9.5  
11_04_0414 + 17386806-17387936                                         28   9.5  
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726...    28   9.5  
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264...    28   9.5  
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128...    28   9.5  

>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score =  132 bits (320), Expect = 2e-31
 Identities = 58/86 (67%), Positives = 76/86 (88%)
 Frame = +2

Query: 503 EEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 682
           + KAQLVVIAHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 141 QSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVK 200

Query: 683 SGDRASFSKVVEAIKTNFNERYEELR 760
           + D+  FSK++EAIK NFN++++E+R
Sbjct: 201 NEDKLEFSKILEAIKANFNDKFDEVR 226



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 145 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRRR 261
           NPLFEKRPK F IG  + P +DL RFV+WPK +RIQR+R
Sbjct: 22  NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 60



 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 36/101 (35%), Positives = 51/101 (50%)
 Frame = +3

Query: 210 LVQICKMAQVYPHPAQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 389
           L +  K  +V     Q+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYRPE     
Sbjct: 44  LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 102

Query: 390 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKKR 512
                                +P  ++ G N VT L+E+ +
Sbjct: 103 KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSK 143


>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/86 (66%), Positives = 77/86 (89%)
 Frame = +2

Query: 503 EEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 682
           + KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V+
Sbjct: 126 QSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVK 185

Query: 683 SGDRASFSKVVEAIKTNFNERYEELR 760
           + D+  FSK++EAIK+NFN++++E+R
Sbjct: 186 NEDKLEFSKILEAIKSNFNDKFDEVR 211



 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 145 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRRR 261
           NPLFEKRPK F IG  + P +DL RFVRWPK +RIQR+R
Sbjct: 23  NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQR 61



 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = +3

Query: 255 QKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 374
           Q+ VL++RLKVPP +NQFT+TLDK       ++L++ + E
Sbjct: 60  QRRVLKQRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99


>08_02_0211 -
           14333553-14333684,14333795-14333887,14334019-14334105,
           14334220-14334389,14334985-14335186,14335604-14335606
          Length = 228

 Score = 91.1 bits (216), Expect = 9e-19
 Identities = 46/86 (53%), Positives = 62/86 (72%)
 Frame = +2

Query: 503 EEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 682
           + KAQLVVIAHDVDPIELV++LPALCRKM               +VH+KT + L LT V+
Sbjct: 125 QSKAQLVVIAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVK 170

Query: 683 SGDRASFSKVVEAIKTNFNERYEELR 760
           + D+  FSK++EAIK NFN++++E+R
Sbjct: 171 NEDKLEFSKILEAIKANFNDKFDEVR 196



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 145 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRRR 261
           NPLFEKRPK F IG  + P +DL RFV+WPK +RIQR+R
Sbjct: 6   NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQR 44



 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 36/101 (35%), Positives = 51/101 (50%)
 Frame = +3

Query: 210 LVQICKMAQVYPHPAQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 389
           L +  K  +V     Q+ +L++RLKVPP +NQFT+TLDK  A  LFK+L KYRPE     
Sbjct: 28  LHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAA 86

Query: 390 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVEKKR 512
                                +P  ++ G N VT L+E+ +
Sbjct: 87  KKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSK 127


>06_01_1127 +
           9294079-9294193,9294300-9294369,9294611-9294716,
           9295665-9295805,9296377-9296475
          Length = 176

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = +2

Query: 500 REEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRKTCTCLALT 673
           R  +  L +IA ++ PI+++  +P LC +  +PY  V  K  L       R TC  L LT
Sbjct: 57  RRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLT 116

Query: 674 NVESGDRASFSKVVEAIKTNFNERYEELRNTG 769
               G+      V E +KT++++   E+   G
Sbjct: 117 KPAKGELE--EDVKEKLKTDYDQVMSEVAEAG 146


>10_01_0125 +
           1509642-1509759,1509847-1509950,1510693-1510824,
           1510936-1510962
          Length = 126

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +2

Query: 512 AQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVES 685
           A+ VV+A D +P+E++L LP L     VPY  V  K  LG    V R    C   +N  S
Sbjct: 49  AEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEAS 108

Query: 686 GDRASFSKVVEAIK 727
             R   + +  AI+
Sbjct: 109 NLRDPINNLKVAIE 122


>02_05_0610 -
           30342105-30342266,30343024-30343129,30343788-30343857,
           30343978-30344092
          Length = 150

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 22/80 (27%), Positives = 38/80 (47%)
 Frame = +2

Query: 518 LVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRA 697
           L VIA ++ PI+++  +P LC +  +PY  V  K  L      K  TC  L   +     
Sbjct: 63  LCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMTKPAKGE 122

Query: 698 SFSKVVEAIKTNFNERYEEL 757
              +V E +K++++    E+
Sbjct: 123 INEEVKEKLKSDYDHVVAEV 142


>03_02_0321 +
           7443835-7443837,7443957-7444077,7444168-7444271,
           7445056-7445187,7445285-7445311
          Length = 128

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +2

Query: 512 AQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVES 685
           ++ VV+A D +P+E++L LP L     VPY  V  K  LG    V R    C   +N  S
Sbjct: 51  SEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGS 110

Query: 686 GDRASFSKVVEAIK 727
             +     + +AI+
Sbjct: 111 QLKTPIQNLKDAIE 124


>07_03_1414 - 26403361-26403969
          Length = 202

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -2

Query: 273 AEVQPSALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 115
           A  +P+AL A +  P +  G++  + + +T  + L P LEE +    GL L+D
Sbjct: 70  AATKPTALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122


>07_03_1422 + 26462871-26463434,26463772-26463897
          Length = 229

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -2

Query: 273 AEVQPSALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 115
           A  +P+AL   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 68  AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120


>07_03_1413 - 26396426-26396890
          Length = 154

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -2

Query: 273 AEVQPSALDADILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFD 115
           A  +P+AL   +  P Y  G+V  + + +T  + L P LEE      GL L D
Sbjct: 22  AATKPTALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74


>12_01_0924 +
           9161155-9161646,9161748-9162164,9162250-9162313,
           9162621-9163030
          Length = 460

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 227 DGPSISASSAEGCTSASSESAPSDQPIYPDTGQDYS*GPFQ 349
           D P +  S  E  +S +S  A  +QP  P T  D++ GP +
Sbjct: 268 DAPRVEVSPTERRSSCASTEAAEEQPPVP-TAVDHTMGPIE 307


>11_04_0414 + 17386806-17387936
          Length = 376

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 545 DQHHER*PQAAPFLLDQLGDCVCAGSDGVGPLW 447
           D+HH     AAP + +Q+ D  C G    GP W
Sbjct: 215 DEHHPAAAAAAPSI-EQVFDLFCDGRSIAGPQW 246


>07_01_0875 -
           7265529-7265588,7265681-7265746,7266008-7266293,
           7267138-7267142
          Length = 138

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 479 KHSHQAGREEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 631
           + + +A  +  AQL V+A D D  + V  + ALC +  V    V     LG
Sbjct: 43  REAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93


>07_01_0360 +
           2646279-2646283,2647113-2647398,2648043-2648108,
           2648199-2648258
          Length = 138

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +2

Query: 479 KHSHQAGREEKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLG 631
           + + +A  +  AQL V+A D D  + V  + ALC +  V    V     LG
Sbjct: 43  REAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 93


>02_04_0587 +
           24110333-24110584,24111193-24111261,24112347-24112850,
           24113094-24113336
          Length = 355

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -1

Query: 190 PDQ*QSSLASSRREDSRSSWAQPF*PPMGRR 98
           P    SSLA +RR  +R   AQP  PP  RR
Sbjct: 24  PSSAASSLAFARRAAARPLRAQPLLPPAARR 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,141,084
Number of Sequences: 37544
Number of extensions: 429195
Number of successful extensions: 1291
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)