Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0035
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 124 9e-29
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 59 3e-09
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 54 1e-07
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 53 3e-07
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 52 6e-07
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 51 8e-07
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 48 6e-06
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 42 6e-04
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 41 0.001
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 40 0.002
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 40 0.002
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 40 0.003
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 39 0.005
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 37 0.018
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021... 33 0.22
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557... 32 0.39
03_01_0396 + 3079840-3079946,3080503-3080737,3080826-3080933,308... 32 0.52
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 31 0.68
12_01_0991 - 10057736-10058249,10058412-10059241,10059266-100606... 30 1.6
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 30 1.6
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 30 2.1
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 28 6.4
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 28 6.4
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 28 6.4
12_02_0583 + 20810976-20812028,20812727-20812882,20813029-20813415 28 8.4
11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,422... 28 8.4
06_01_0048 + 436156-436406,436514-436693,436725-437133 28 8.4
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 124 bits (298), Expect = 9e-29
Identities = 55/83 (66%), Positives = 66/83 (79%)
Frame = +2
Query: 5 TRQDPGATLMMMELLQEAGAPPGVVNIIHGTHGAVNFICDQPEIKAVSFVGGDAAGKHIY 184
+ +DPGA +M+ EL EAG P GV+NI+HGTH VN ICD +IKAVSFVG + AG HIY
Sbjct: 195 SEKDPGAAMMLAELAMEAGLPKGVLNIVHGTHDVVNNICDDEDIKAVSFVGSNIAGMHIY 254
Query: 185 TRASAAGKRVQSNMGAKNHGVIM 253
+RASA GKRVQSNMGAKNH +I+
Sbjct: 255 SRASAKGKRVQSNMGAKNHAIIL 277
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMIN 689
++ LDGR + VP FE GNFVGPT++ DV MECYKEEIFGPVL+ + E+LD+AIQ++N
Sbjct: 370 RVLLDGRDIVVPNFENGNFVGPTLLADVKSEMECYKEEIFGPVLLLMKAESLDDAIQIVN 429
Query: 690 SNPYG 704
N YG
Sbjct: 430 RNKYG 434
Score = 81.0 bits (191), Expect = 9e-16
Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Frame = +1
Query: 256 DANKEHTLNQLXXXXXXXXXQRCMALSTAVFVGSAKEWI------PDLVKREQALKVNAG 417
DA+++ TLN L QRCMALSTAVFVG ++ WI +LVKR +L VN+G
Sbjct: 279 DADRDATLNALIAAGFGAAGQRCMALSTAVFVGGSEPWIRPGIREDELVKRASSLVVNSG 338
Query: 418 HVPGTDVGPVISVAAKDRILRLVESGVKEGVNWL 519
D+GPVIS AK+RI +L++SG G L
Sbjct: 339 MASDADLGPVISKQAKERICKLIQSGADNGARVL 372
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 462 QGQNLKACGVRCKGRRKLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVL 641
Q + +K K + L G V+ EKG ++ PTIITDV SM+ ++EE+FGPVL
Sbjct: 362 QYEKIKQFVSTAKSQGATILTG-GVRPKHLEKGFYIEPTIITDVDTSMQIWREEVFGPVL 420
Query: 642 VCLFVETLDEAIQMINSNPYGM 707
T +EAI++ N YG+
Sbjct: 421 CVKEFSTEEEAIELANDTHYGL 442
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 LMMMELLQEAGAPPGVVNIIHGTHGAVNF-ICDQPEIKAVSFVGGDAAGKHIYTRASAAG 205
L + ++ +E G P GV+NI+ G + P + V+F G GK I A+
Sbjct: 216 LELADVCKEVGLPSGVLNIVTGLGSEAGAPLSSHPGVDKVAFTGSYETGKKIMASAAPMV 275
Query: 206 KRVQSNMGAKNHGVI 250
K V +G K+ V+
Sbjct: 276 KPVSLELGGKSPIVV 290
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 316 QRCMALSTAVFVGS-AKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVES 492
Q C A S + AKE+ +V + +KV+ G +GPV+S ++I + V +
Sbjct: 313 QICSATSRLILHKKIAKEFQERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKQFVST 372
Query: 493 GVKEGVNWLSTVARSKY 543
+G L+ R K+
Sbjct: 373 AKSQGATILTGGVRPKH 389
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +3
Query: 489 VRCKGRRKLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLD 668
+R +G K+ G A++ +GNFV PTI+ +++PS +EE+FGPVL + V+ L
Sbjct: 384 IRSQGG-KILYGGSAIE----SEGNFVQPTIV-EISPSAPVVREELFGPVLYVMKVQNLK 437
Query: 669 EAIQMINSNPYGM 707
EA+++ NS P G+
Sbjct: 438 EAVEINNSVPQGL 450
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
++G F+ PTIIT+V+ SM+ ++EE+FGPV+ T EA+++ N YG+
Sbjct: 372 KRGFFIEPTIITNVSTSMQIWREEVFGPVICVKEFRTEREAVELANDTHYGL 423
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 23 ATLMMMEL---LQEAGAPPGVVNIIHGTHGAVNF-ICDQPEIKAVSFVGGDAAGKHIYTR 190
A+L +EL E G PPGV+NII G + P + ++F G GK I
Sbjct: 192 ASLTCLELGGICAEIGLPPGVLNIITGLGTEAGAPLASHPHVDKIAFTGSTETGKRIMIT 251
Query: 191 ASAAGKRVQSNMGAKN 238
AS K V +G K+
Sbjct: 252 ASQMVKPVSLELGGKS 267
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +3
Query: 543 PGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
P +KG ++ PTI DV M +EEIFGPV+ + +T++EAI+ N YG+
Sbjct: 387 PTGDKGYYIEPTIFVDVKEEMTIAQEEIFGPVMSLMKFKTVEEAIEKANCTKYGL 441
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 23 ATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHIYTRA 193
A L +++ +AG P GV+N++ G T GA + ++ +V+F G G+ I A
Sbjct: 214 AKLCTFDIIIQAGVPDGVINVVPGFGPTAGAA--LSSHMDVDSVAFTGSAEIGRAIMESA 271
Query: 194 SAAG-KRVQSNMGAKNHGVI 250
+ + K V +G K+ ++
Sbjct: 272 ARSNLKNVSLELGGKSPMIV 291
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 247 DNADANKEHTLNQLXXXXXXXXXQRCMALSTA-VFVGSAKEWIPDLVKREQALKVNAGHV 423
D+AD + +L+ L + C+A S V G E++ V+ + KV
Sbjct: 293 DDADVDMAVSLSSLAVFFNKG--EICVAGSRVYVQEGIYDEFVKKAVEAAKNWKVGDPFD 350
Query: 424 PGTDVGPVISVAAKDRILRLVESGVKEGVNWLS 522
T++GP + +R+L+ +E G EG L+
Sbjct: 351 AATNMGPQVDKVQFERVLKYIEIGKNEGATLLT 383
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3
Query: 543 PGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
P +KG ++ PTI T+V M +EEIFGPV+ + +T++EAI+ N YG+
Sbjct: 398 PCGKKGYYIEPTIFTNVKDDMVIAREEIFGPVMCLMKFKTVEEAIERANGTRYGL 452
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P + L + L ++AG P GV+N++ G T GA I ++ V+F G G+ I
Sbjct: 221 QTPLSALFLAHLSKQAGVPDGVINVVTGFGPTAGAA--ISSHMDVDVVAFTGSTEVGRLI 278
Query: 182 YTRASAAG-KRVQSNMGAKNHGVI 250
++ + K V +G K+ ++
Sbjct: 279 MEASAKSNLKPVALELGGKSPFIV 302
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
+KG ++ PTI +DV +M +EEIFGPV L L+E I+ N++ YG+
Sbjct: 424 DKGYYIQPTIFSDVQDNMRIAQEEIFGPVQSILKFNDLNEVIKRANASQYGL 475
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P + L +LL EAG P GVVN++ G T GA + ++ ++F G GK +
Sbjct: 244 QTPLSALFASKLLHEAGLPDGVVNVVSGFGPTAGAA--LASHMDVDKIAFTGSTDTGKVV 301
Query: 182 YTRASAAG-KRVQSNMGAKNHGVIM 253
A+ + K V +G K+ +IM
Sbjct: 302 LELAARSNLKSVTLELGGKSPFIIM 326
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 555 KGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGME 710
+GN + P ++ V P M EE FGPVL + + +++E I N++ +G++
Sbjct: 372 EGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ 423
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 ATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRASA 199
A L M+ AG P G++N + G + +F+ P + +SF GGD I A
Sbjct: 203 AALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTMHPGVNCISFTGGDTG---IAISKKA 259
Query: 200 AGKRVQSNMGAKNHGVIM 253
+Q +G K+ V++
Sbjct: 260 GMVPLQMELGGKDACVVL 277
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINS 692
EK + PT++ DV EEIFGP+L + V+ ++++IQ INS
Sbjct: 330 EKQLKIAPTVLLDVPLDTTLMAEEIFGPLLPIVTVDKIEDSIQFINS 376
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 564 FVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
F PT++ +V +M+ +EE FGP+L + + +E +++ N + YG+
Sbjct: 391 FFPPTVLVNVNHTMKIMQEEAFGPILPIMKFNSDEEVVKLANDSKYGL 438
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P + L + LL EAG P GV+N++ G T GA + + ++F G GK +
Sbjct: 248 QTPLSALFVASLLHEAGLPDGVLNVVSGFGPTAGAA--LSSHMGVDKLAFTGSTGTGKIV 305
Query: 182 YTRASAAG-KRVQSNMGAKNHGVIM 253
A+ + K V +G K+ ++M
Sbjct: 306 LELAARSNLKPVTLELGGKSPFIVM 330
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEK----GNFVGPTIITDVTPSMECYKEEIFGPV 638
K +D A V G ++ G ++ PT+ DV M+ +EEIFGPV
Sbjct: 410 KSGVDSGATLVAGGDRAGSRGFYIQPTVFADVEDEMKIAQEEIFGPV 456
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +3
Query: 561 NFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
+F PT++ +V+ M ++EE+FGPV + +T ++AI+M N G+
Sbjct: 437 SFYEPTVVGNVSNDMLLFREEVFGPVAPLVPFKTEEDAIRMANDTNAGL 485
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 PGATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRA 193
P L +L +AG P G +N++ G + + + +++ ++F G A GK + +
Sbjct: 257 PLTALAAADLALQAGIPAGAINVVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGS 316
Query: 194 SAAGKRVQSNMG 229
+ K+V +G
Sbjct: 317 ANTVKKVSLELG 328
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 352 GSAKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVESGVKEGVN 513
G +++ +K Q+LKV G T GP+I+ AA ++ + + +G N
Sbjct: 371 GIYEKFASAFIKAVQSLKVGNGLEESTSQGPLINEAAVQKVEKFINDATSKGAN 424
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINS 692
+ PTI DV KEEIFGP+L + V+ + E+ +INS
Sbjct: 306 IAPTIFMDVPLDSGIMKEEIFGPLLPIITVDKIHESFALINS 347
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P + L L + AG P GV+N++ G T GA I +I VSF G G+ +
Sbjct: 194 QTPLSALFYAHLAKLAGVPDGVLNVVPGFGPTAGAA--ISSHMDIDKVSFTGSTEVGRLV 251
Query: 182 YTRASAAG-KRVQSNMGAKNHGVI 250
A+ + K V +G K+ ++
Sbjct: 252 MEAAAKSNLKPVSLELGGKSPVIV 275
>02_05_0131 +
26098459-26098668,26098788-26098863,26101972-26102178,
26102311-26102435,26102740-26102900,26102977-26103067,
26103161-26103310,26103396-26103632
Length = 418
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+ PT++ + + EE+FGP+L + V+ +++ I + S P
Sbjct: 262 IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKP 305
>02_05_0127 -
26053055-26053306,26055415-26055564,26055657-26055747,
26055835-26055995,26056455-26056579,26056680-26056886,
26056936-26056996
Length = 348
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 564 FVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
++ PTI+ + + EEIFGP+L + V+ ++ I + S P
Sbjct: 186 WIEPTIVLNPPFDSDIMMEEIFGPLLPIITVKKTEDCIAFLKSKP 230
>03_01_0396 +
3079840-3079946,3080503-3080737,3080826-3080933,
3081009-3081178,3081607-3081740,3081856-3082027,
3082160-3082712,3082836-3082948,3083051-3083294,
3083434-3083652
Length = 684
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -3
Query: 596 RHVGDDSGPDEIAFLESGYFDRATVESQFTPSFTPDSTSLKILSLAATEMTGPTSVP 426
RH+G S P + + A+ + + P+F + T +I T TGP P
Sbjct: 243 RHIGTTSWPGRLTLTNKALYFEASGKISYEPAFKVELTGSEIGKQVKTTSTGPFGAP 299
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+ PTI+ + EEIFGP+L + V+ ++++I + + P
Sbjct: 334 IEPTILLNPPLDSAIMTEEIFGPLLPIITVKKIEDSIAFVRARP 377
>12_01_0991 -
10057736-10058249,10058412-10059241,10059266-10060633,
10061785-10062327,10066274-10066498,10066590-10066640
Length = 1176
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 572 PDEI---AFLESGYFDRATVESQFTPSFTPDSTSLKILSLAATEMTG 441
PDEI A LE YF + S PS + +LK+L L +T TG
Sbjct: 568 PDEIGRMASLEEVYFQGNNLMSTMIPSSFKNLCNLKVLDLRSTNTTG 614
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 325 MALSTAVFVGSAKEWIPDLVKREQ-ALKVNAGHVPGTDVGPVISVAAKDRILRLVE 489
+A + ++ VGSA +W+ L+K+ Q AL + V VG I++ D I LVE
Sbjct: 252 LAAAASMPVGSAGKWMDSLLKKYQDALHGHKEVVSAMQVGTFIAIKDLDSIRVLVE 307
>04_04_0605 +
26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +1
Query: 331 LSTAVFVGSAKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVESGVKEGV 510
++ A V +++ D R L NAG + G D PV+ KD+I + V + V
Sbjct: 739 VTDAASVARLADFVRDQFGRLDILINNAG-ISGVDRDPVLVAKVKDQIEGM---DVDQRV 794
Query: 511 NWLSTVARSKYPDSRKAISS 570
W+ ++ Y +++ I++
Sbjct: 795 EWMRENSKETYDEAKSCITT 814
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 408 DLQSLLTLHQVRDPLLSTADKDRSAERHAPLTGRSEGR 295
D+ L+ L Q + STA DRS+ H+ LT +GR
Sbjct: 475 DVIDLMNLGQKNRAVCSTAMNDRSSRSHSCLTVHVQGR 512
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 586 VMIVGPTKLP--FSNPGTLTARPSRANLRLPLHLTPQA 479
+M+V K P F + T+TA+P+RA +P +P+A
Sbjct: 26 MMLVRTVKKPSKFEDSDTVTAKPARAVFEMPHRTSPRA 63
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 239 DSWRPCCFGHVCQQPK 192
DSW PC G C++PK
Sbjct: 643 DSWLPCVTGKTCRKPK 658
>12_02_0583 + 20810976-20812028,20812727-20812882,20813029-20813415
Length = 531
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 171 PAASPPTKDTALISGWSHMKFTAPCVP*MILTTPGGAPAS*RS 43
PAAS + T L W H+ APC+ + P + +S R+
Sbjct: 36 PAASDVARTTVLSRRWRHLWSAAPCLRFAVEPAPPPSTSSRRA 78
>11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,
4221561-4222094,4222388-4222842,4223073-4223189,
4223319-4223477
Length = 2170
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = -3
Query: 614 VTLHARRHVGDDSGPDEIAFLESGYFDRATVESQFTPSFTPDSTSLKILSLAAT 453
V LH + + S +++A E+G D T +P + ++T + +L + T
Sbjct: 1237 VALHLLTQLAEGSETNKVAMAEAGVLDALTKYLSLSPQDSTETTIINLLRILYT 1290
>06_01_0048 + 436156-436406,436514-436693,436725-437133
Length = 279
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 125 QPEIKAVSFVGGDAAGKHIYTRASAAGKRVQSNMGAKNHG 244
QPE A + VG +A + A++A +S G +HG
Sbjct: 114 QPEAVAATPVGAEAEASELVAAAASAAAVARSGCGCGDHG 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,442,948
Number of Sequences: 37544
Number of extensions: 398934
Number of successful extensions: 1265
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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