Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0035
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 98 7e-21
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 98 7e-21
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 49 3e-06
SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 48 8e-06
SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 47 2e-05
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 47 2e-05
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 45 5e-05
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 41 0.001
SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 38 0.008
SB_6771| Best HMM Match : Aldedh (HMM E-Value=0) 37 0.019
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4) 35 0.057
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 33 0.23
SB_15654| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 29 2.8
SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05) 29 4.9
SB_56617| Best HMM Match : RVT_1 (HMM E-Value=0.04) 28 8.6
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 97.9 bits (233), Expect = 7e-21
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +3
Query: 513 LALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINS 692
L LDGR + V G+E GNFVGPT++++VTP M CYKEEIFGPVLV L +TL++A+++IN
Sbjct: 99 LDLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVEIINR 158
Query: 693 NPYG 704
NPYG
Sbjct: 159 NPYG 162
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +1
Query: 316 QRCMALSTAVFVGSAKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVESG 495
QRCMALSTA+FVG KEWIP++V++ + LKV+AG PG D+GP+IS AK R LV+SG
Sbjct: 33 QRCMALSTAIFVGETKEWIPEIVEKAKQLKVSAGDQPGADLGPMISPQAKKRACDLVQSG 92
Query: 496 VKEGVN 513
V++G +
Sbjct: 93 VEQGAS 98
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 107 VNFICDQPEIKAVSFVGGDAAGKHIYTRASAAGKR 211
V FIC+ P IKA+SFVG D A + AAG+R
Sbjct: 2 VKFICENPTIKAISFVGSDQA--LVGAAFGAAGQR 34
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 97.9 bits (233), Expect = 7e-21
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +3
Query: 513 LALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINS 692
L LDGR + V G+E GNFVGPT++++VTP M CYKEEIFGPVLV L +TL++A+++IN
Sbjct: 99 LDLDGRDIVVKGYENGNFVGPTVLSNVTPEMTCYKEEIFGPVLVALNADTLEDAVEIINR 158
Query: 693 NPYG 704
NPYG
Sbjct: 159 NPYG 162
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +1
Query: 316 QRCMALSTAVFVGSAKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVESG 495
QRCMALSTA+FVG KEWIP++V++ + LKV+AG PG D+GP+IS AK R LV+SG
Sbjct: 33 QRCMALSTAIFVGETKEWIPEIVEKAKQLKVSAGDQPGADLGPMISPQAKKRACDLVQSG 92
Query: 496 VKEGVN 513
V++G +
Sbjct: 93 VEQGAS 98
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +2
Query: 107 VNFICDQPEIKAVSFVGGDAAGKHIYTRASAAGKR 211
V FIC+ P IKA+SFVG D A + AAG+R
Sbjct: 2 VKFICENPTIKAISFVGSDQA--LVGAAFGAAGQR 34
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +3
Query: 555 KGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
KG F+ PT+ +DVT M KEEIFGPV + +++DE I+ N+ YG+
Sbjct: 685 KGFFIQPTVFSDVTDDMRIAKEEIFGPVQQLIKFKSVDEVIERANNTTYGL 735
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P L L++EAG P GVVN+I G T GA I +I VSF G G+ I
Sbjct: 505 QTPLTALYFCALVKEAGFPAGVVNVIPGYGPTAGAA--ITTHLDIDKVSFTGSTEVGRLI 562
Query: 182 YTRASAAG-KRVQSNMGAKNHGVI 250
++ + KR+ +G K+ ++
Sbjct: 563 QEASAKSNLKRLTLELGGKSPNIV 586
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 319 RCMALSTAVFVGSA--KEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVES 492
+C + + FV E++ VKR +A V + GP I D+I+ L+ES
Sbjct: 609 QCCSAGSRTFVQDTIYDEFVKKSVKRAKARTVG-DPFDSVEQGPQIDQEQFDKIMDLIES 667
Query: 493 GVKEG 507
G KEG
Sbjct: 668 GKKEG 672
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 23 ATLMMMELLQEAGAPPGVVNIIHGTHGAVNFICDQPEIKAVSFVGGDAAGKHIYTRASAA 202
+ L+ E+ EAG PPGV N++ G + + P++ V+F G GK + + +
Sbjct: 809 SALLFAEICAEAGLPPGVFNVVTGNGAFGSQLAGHPDVDKVAFTGSTEVGKLLRQLTAGS 868
Query: 203 GKRVQSNMGAKNHGVI 250
GK++ +G K+ V+
Sbjct: 869 GKKLSLELGGKSPFVV 884
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 537 KVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
K G + PT+IT+V P + EE+FGPVLV L T EA+ + N+ +G+
Sbjct: 977 KCASLPSGCYYPPTLITNVQPVSKIVMEEVFGPVLVVLTFRTAKEAVAIANNTNFGL 1033
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/78 (33%), Positives = 37/78 (47%)
Frame = +2
Query: 17 PGATLMMMELLQEAGAPPGVVNIIHGTHGAVNFICDQPEIKAVSFVGGDAAGKHIYTRAS 196
P + + ++L EAG PPGVVNII G + P + VSF G G+ I +
Sbjct: 450 PMNAVALADILTEAGVPPGVVNIIQGGGETGEMLSKDPNVAKVSFTGSVPTGQKIMASCA 509
Query: 197 AAGKRVQSNMGAKNHGVI 250
K V +G K+ +I
Sbjct: 510 DGIKHVTLELGGKSPLII 527
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 510 KLALDGRAVKVPG-FEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMI 686
K+ G + +P G ++ P ++ + T M KEEIFGPV+ L +T +EA+
Sbjct: 616 KVLCGGERLHLPEPLTSGYYMSPCVMAECTDDMTVVKEEIFGPVMTVLTFQTEEEAVTRA 675
Query: 687 NSNPYGM 707
N+ +G+
Sbjct: 676 NNTTFGL 682
>SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMIN 689
+K ++ PTI+T V PS + EIFGP+L + V++LD+AI IN
Sbjct: 279 DKERYISPTILTGVKPSDPVMENEIFGPILPIVSVDSLDDAIDFIN 324
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYT 187
Q P + L + EL +A P GV NII G+ + N +CD I+ +SF G A G+ +Y
Sbjct: 119 QTPLSALALGELALKAEIPDGVFNIIVGSSSLISNKLCDSDIIRKLSFTGSTAVGQDLYQ 178
Query: 188 RASAAGKRVQSNMG 229
+++ K++ +G
Sbjct: 179 KSAKTLKKLSLELG 192
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 558 GNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
GNF+ P ++ + +M + EEIF PV+ T +E I + N +G+
Sbjct: 301 GNFLNPVVLGNCNSNMRIFNEEIFAPVIAVYKFSTDEEVINLANKTRFGL 350
Score = 36.7 bits (81), Expect = 0.019
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 DANKEHTLNQLXXXXXXXXXQRCMALSTAVFVGSA--KEWIPDLVKREQALKVNAGHVPG 429
DAN + ++ L Q C+ + VFV S ++I L+ Q LKV G G
Sbjct: 202 DANLDKAVSGLINSKFRNAGQTCVC-ANRVFVDSKIYDQFIEKLIPVVQDLKVGNGLDSG 260
Query: 430 TDVGPVISVAAKDRILRLVESGVKE 504
++GP+I+ AA D L++ + +
Sbjct: 261 VNIGPLINQAAIDHAKGLIDDAINQ 285
>SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16)
Length = 266
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 32 MMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRASA 199
MM EL+ +AG PPGV+NI+ GT + I P++ +SF G G+ + T+ SA
Sbjct: 191 MMAELINDAGFPPGVINIVFGTGSRTGSAIVQHPDVHLISFTGSTTIGE-LITKMSA 246
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
+KG F+ PT+ +DV +M +EEIFGPV+ + +++ I+ N YG+
Sbjct: 108 DKGYFIQPTVFSDVQDNMRIAQEEIFGPVMQIFRFKDMNDIIERANKTTYGL 159
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 PGATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHI 181
P L EL AG P GV+NI+ G+ V N IC+ P+++ + F G GK I
Sbjct: 759 PMTALKFAELAARAGFPKGVINILPGSGSVVGNRICEHPDVRKLGFTGSTPVGKAI 814
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 561 NFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
NF PT++TDV+P M KEE FGP+ + +T EA+ + NS G+
Sbjct: 363 NFFEPTVLTDVSPDMLVCKEETFGPLAPLVRFKTEAEAVAIANSTQSGL 411
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 5 TRQDPGATLMMMELLQEAGAPPGVVNIIHGTHGAVNFICD----QPEIKAVSFVGGDAAG 172
+ + P L + +L +EAG P GV+N I + VN + D + +SF G A G
Sbjct: 175 SEETPFCALALQQLAEEAGFPAGVINTIPCSRDRVNEVTDTVLKSDLVSKMSFTGSTATG 234
Query: 173 KHIYTRASAAGKRVQSNMG 229
K + + K++ +G
Sbjct: 235 KILMAKCVDTVKKMSLELG 253
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 391 EQALKVNAGHVPGTDVGPVISVAAKDRILRLVESGVKEG 507
+Q LK+ G GT GP+I+ A +++ R V + +G
Sbjct: 310 DQQLKIGNGMDAGTTQGPLINKMAVEKVERHVADALSKG 348
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 546 GFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGME 710
G + +FV P I+ V +M+ Y+EE FGPV+ L + + E + ++ + YG +
Sbjct: 119 GERQESFVYPAILYPVNSTMKIYEEEQFGPVVPILSFKDIQEPLDYVSESNYGQQ 173
>SB_26122| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 462
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 32 MMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRASAAGK 208
++ ++L+++G P GVVNI++G + + ++ AV+ VG + A + + K
Sbjct: 196 LLAKVLKDSGIPKGVVNIVYGRGEVIGRILARHHDVAAVALVGSERAAFSVTMESGPRVK 255
Query: 209 RVQSNMG 229
RV +G
Sbjct: 256 RVSYELG 262
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 379 LVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVESGVKEG 507
LVK + +K+ T +GP+IS K +L L++ + +G
Sbjct: 315 LVKAIRKIKIGNPQESSTQIGPLISKEQKQTVLALIQGAINDG 357
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSME--CYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
++G FV PT++ SM+ + E+ GPV+ + + EA+ +N YG+
Sbjct: 374 DRGFFVEPTVLGGFKNSMDNPINQLEVQGPVVRIIPFRSESEALSGVNVTAYGL 427
>SB_6771| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 523
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +3
Query: 558 GNFVGPTIITDVTPSMECYKEEIFGPVLVCLFV---ETLDEAIQMI-NSNPYGM 707
G FV PTI+ P + KEEIFGPV VC +V E E + ++ N+N + +
Sbjct: 386 GYFVEPTIVETSNPYNKMMKEEIFGPV-VCAYVYPDEKYKEMMDVVDNTNEFSL 438
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 35 MMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVG 157
+ME+ QEAG P GV+N + + N + P + AV+F G
Sbjct: 222 VMEMFQEAGLPDGVINFVPSSGSTFGNAMTTSPHLAAVNFTG 263
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVE--TLDEAIQM 683
KL GR + PGF F P + T+V M KEE FGPV++ + ++ ++
Sbjct: 128 KLVYGGRHLDRPGF----FFEPAVFTNVEDDMFIAKEESFGPVVIISKFDDGDVEGVLES 183
Query: 684 INSNPYGM 707
N YG+
Sbjct: 184 ANGTEYGL 191
>SB_30067| Best HMM Match : Aldedh (HMM E-Value=1.4)
Length = 119
Score = 35.1 bits (77), Expect = 0.057
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 549 FEKGNFVGPTIITDVTPSMECYKEEIF 629
++ G F+ PT+ITDV S C +EEIF
Sbjct: 92 YKNGYFMRPTVITDVKDSSRCMQEEIF 118
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYT 187
Q P + + E++ P G N++ G V + + + I A++F G G+ +
Sbjct: 179 QVPASAWALTEIISRQNLPAGTFNLVMGPGADVGDVMINSRGINALTFTGSLETGRKVAA 238
Query: 188 RASAAGKRVQSNMGAKNHGVIM 253
+ + Q MG+KN +++
Sbjct: 239 ATAVNLVKCQLEMGSKNALIVL 260
>SB_15654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = -3
Query: 656 NEQTDENRPEYFLF--------VTLHARRHVGDDSGPDEIAFLESGYFDRATVESQFTPS 501
++ D RP YF+F VT + V + P + + Y D++T + +
Sbjct: 66 DDSNDGLRPNYFIFAPEVLHVGVTENISVTVSGVTRPVNVTLFLTDYPDKSTEFAHAQGT 125
Query: 500 FTPDSTSLKILSLAATEMTGPT 435
F PD + + ATE+T P+
Sbjct: 126 FRPDENGFLSVKVNATEVTPPS 147
>SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14)
Length = 266
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 17 PGATLMMMELLQEAGAPPGVVNIIHGT-HGAVNFICDQPE 133
P L + EL EAG P GVVN++ G H A + P+
Sbjct: 227 PLTALKLAELALEAGYPAGVVNVVTGLGHEAGAALSSHPQ 266
>SB_16513| Best HMM Match : Aldedh (HMM E-Value=9.9e-05)
Length = 301
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 561 NFVGPTIITDVTPSMECYKEEIFGPV 638
NF PT++TDV EE FGP+
Sbjct: 228 NFFEPTVLTDVNQDTLVCMEETFGPL 253
>SB_56617| Best HMM Match : RVT_1 (HMM E-Value=0.04)
Length = 447
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 527 TVESQFTPSFTPDSTSLKILSLAATEMTGPTSVPG 423
T+ +PS T K+ SL T+ TGP VPG
Sbjct: 142 TIPPTDSPSVTELGVLKKLSSLNTTKATGPDGVPG 176
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,645,196
Number of Sequences: 59808
Number of extensions: 432650
Number of successful extensions: 1232
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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